Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3723 ATGGAGGAACAAGATAAACTCCAAGAAACTGGACTTGAATCTCAACTGGCTTCATGTTTTTCTTCTTCCTCTAGCAAAAGTCTTGTGTTTCCTTCTAGACCTGGCTATGGAAAACTTGGGACAAAGTGTGTTGTCAAAGCTAATCACTTCCTTGCAGATATATCAGTATCTGACTTGAGCCATTACCAAGTTACTATAACTCCTGAAGTATTTTTTCGAAAAAAAAGAAAAGCTATCATAGTAGAGTTAGTGAGGCTTCATCGGAACACTGAGTTGGGAAGGAAGCTTCCTGTTTATGATGGCGGAAGGAATCTTTACACTGCCGGTTCGCTTCCTTTTACACACAAGGAGTTCAATATAGTAGTAGTGAATGAGGATGATGAAGGTGCTAGCAGCAGTACAAGGGAAAGAGAATTTGAAGTTGAAATCAAGTTTGTAGCTCATGTTAGCATGCATCAGTTACATGAGCTTCTAAGTGGAAAAAAAGTGGATACTCCACATGAAGCTCTTAAGGTCATTAGCATTGTATTAAAGGAGCTTGCATCTCATAGCTATGTATCATTTGGGAGGTTACTTTATTCTCCGGATTTAAGAAAATCGCATAATCTGAGTGGTGGCTTGGAATTGTGGCACGGTTTCTACCAAAGTATAAAGCCTACTCAGATGGGATTATCGCTTAACGTTGACTTGTCATCATCTGCGTTTATAGAACCGCTCCCTGTGATCGACATTGTAGCTCAAATCTTAGAAAAAGATGTGTACTCAAAGCCAATTTCAGATGCAGATCGCGTCAAGATTAAGAAAGCCTTAAGAGGTGTGAAAGTAGAAGTTACATATAGAGGAAGTTTTAGAAGGAAGTACAGGATAACAGGAGTAACATCACAGCCTACAAGGGAACTCTTTTTCCCTCTGGATGAGAAAATGAACATGAAATCAGTAGTTGATTACTTTCAAGAAATGTATGGATATACAATCATGTATCCTCATTTACCTTGCATTCAAGTAGGCGAAAAGAAGGCGAACTATTTGCCTATGGAGGCATGCAAGATAGTTGAAGGTCAGAGATGTACAAAAGGGCTTAATGATAAGCAGATAACTTCTTTGCTAAAAGTTTCATGCCTAAGGCCACGTGAAAGGGAGAAAGATATTCTCCAGACAATTCATCAAAATGATTATGATTGCAATCCTTATGCAAAGGAGTTTGGTATCAAAGTAGACAAAAAGCTTGCATCAGTCGAGGCTCGAGTTCTTCCTGCTCCATGGTTGAAATATCATGACACTGGAAGAGATTCAAAAATCTTGCCACAATGTGGTCAGTGGAACATGGCAAACAAGAAAGTTATAAATGGAAGCAAAGTAAGATATTGGGCATGTATCAATTTCTCAAGAAATGTCCAACAAAGAACAGCTAATGCATTTTGCCAACAGTTAGTTCAGGCGTGCCAATCTTTAGGCATGGAATTTAGTCATGAACCTGTGATTCCTGTGTATTCAGCAAGACCAGATATGGTTAAGAAGGCCTTGAAGTATGTACATTCTACTTCTCTAAACAAACTTGATGGGAAAGAGCTAGAGTTTCTCATCGCGATTCTTCCAGACAACAATGGCTCTCTCTATGGCGATCTCAAAAAAATCTGCGAAACGGATTTAGGGCTGATTTCTCAATGCTGTCTTACAAAATATGTATTCAAGATTAATAGACATTATTTATCAAATGTAGCACTGAAGATCAATGTCAAGATGGGAGGAAGGAACACAGTACTTTTGGATGCTCTAAGTTGCAGGATTCCATTGGTTAGCGACATTCCAACAATAATTTTCGGAGCTGATGTAAGTCATCCAGAAGCCGGAGAGGATGTTTGTCCATCCCTTGCAGCCGTTGTAGCCTCCCAAGACTGGCCAGAAGTGACAAAGTATGCAGGATTAGTATGTGCTCAGCCTCATCGCGTGGAACTTATTCACGATCTTTTCAAATGTTGGAACGATCCTCATCACGGTATCGTTTATGGTGGCATGATCAGAGAGCTCTTACTCTCATTTCAGAAGGCAACTGGAAAAAAACCACTTAGGATAATATTTTACAGGGATGGGGTAAGTGAAGGACAGTTTTACCAGGTTTTGCTATTTGAGCTTGATGCAATCCGCAAGGCTTGTGCATCTTTGGAACCTGGTTACCAACCTCCGGTTACATTTGTCGTTGTTCAGAAAGGGCATCACACTAGACTCTTCCCAAACAATCACAACGACAGAAACAGCACCGATAGGAGTGGGAATATCTTGCCAGGTACTGTGGTGGATTCGAAGATATGTCATCCTACCGAGTTCGACTTCTACTTGTGCAGTCACGCAGGAATTCAGGGTACAAGTAAACCTGCTCATTATAGTGTTATATGGGACGACAATAACTTCAGTGCCGATGAGATTCAGTCCTTAACTAACAACTTGTGCTACACTTATGCAAGATGTACGCGATCTGTTTCTGTAGTGCCTCCTGTTTACTATGCGCATCTGGCAGCTTACAGAGCTCGATTCTACATGGAACCTGATGTCCACGAAAATGTAAAATCAGAGGTTACAAGATCGAAAGTTGAGTCAGTTAGGCCGCTGCCAGCTCTAAAAGAGAAGGTGAAGAAAGTAATGTTTTACTGTTGA 2652 0.4054 MEEQDKLQETGLESQLASCFSSSSSKSLVFPSRPGYGKLGTKCVVKANHFLADISVSDLSHYQVTITPEVFFRKKRKAIIVELVRLHRNTELGRKLPVYDGGRNLYTAGSLPFTHKEFNIVVVNEDDEGASSSTREREFEVEIKFVAHVSMHQLHELLSGKKVDTPHEALKVISIVLKELASHSYVSFGRLLYSPDLRKSHNLSGGLELWHGFYQSIKPTQMGLSLNVDLSSSAFIEPLPVIDIVAQILEKDVYSKPISDADRVKIKKALRGVKVEVTYRGSFRRKYRITGVTSQPTRELFFPLDEKMNMKSVVDYFQEMYGYTIMYPHLPCIQVGEKKANYLPMEACKIVEGQRCTKGLNDKQITSLLKVSCLRPREREKDILQTIHQNDYDCNPYAKEFGIKVDKKLASVEARVLPAPWLKYHDTGRDSKILPQCGQWNMANKKVINGSKVRYWACINFSRNVQQRTANAFCQQLVQACQSLGMEFSHEPVIPVYSARPDMVKKALKYVHSTSLNKLDGKELEFLIAILPDNNGSLYGDLKKICETDLGLISQCCLTKYVFKINRHYLSNVALKINVKMGGRNTVLLDALSCRIPLVSDIPTIIFGADVSHPEAGEDVCPSLAAVVASQDWPEVTKYAGLVCAQPHRVELIHDLFKCWNDPHHGIVYGGMIRELLLSFQKATGKKPLRIIFYRDGVSEGQFYQVLLFELDAIRKACASLEPGYQPPVTFVVVQKGHHTRLFPNNHNDRNSTDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSKPAHYSVIWDDNNFSADEIQSLTNNLCYTYARCTRSVSVVPPVYYAHLAAYRARFYMEPDVHENVKSEVTRSKVESVRPLPALKEKVKKVMFYC* 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3723 883 Pfam Argonaute linker 2 domain 378 424 IPR032472 -
Tpr4g3723 883 SMART PAZ_2_a_3 243 374 IPR003100 GO:0005515
Tpr4g3723 883 SUPERFAMILY Ribonuclease H-like 517 848 IPR012337 -
Tpr4g3723 883 Pfam Piwi domain 527 846 IPR003165 GO:0003676
Tpr4g3723 883 CDD PAZ_argonaute_like 238 351 - -
Tpr4g3723 883 Pfam N-terminal domain of argonaute 41 177 IPR032474 -
Tpr4g3723 883 ProSiteProfiles Piwi domain profile. 526 847 IPR003165 GO:0003676
Tpr4g3723 883 SUPERFAMILY PAZ domain 233 392 IPR036085 GO:0005515
Tpr4g3723 883 SMART Piwi_a_2 526 847 IPR003165 GO:0003676
Tpr4g3723 883 Gene3D paz domain 233 357 - -
Tpr4g3723 883 ProSiteProfiles PAZ domain profile. 239 352 IPR003100 GO:0005515
Tpr4g3723 883 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 18 882 - -
Tpr4g3723 883 Pfam PAZ domain 262 368 IPR003100 GO:0005515
Tpr4g3723 883 SMART DUF1785_2 186 238 IPR014811 -
Tpr4g3723 883 Pfam Argonaute linker 1 domain 189 236 IPR014811 -
Tpr4g3723 883 CDD Piwi_ago-like 396 846 IPR045246 -
Tpr4g3723 883 Pfam Mid domain of argonaute 435 512 IPR032473 -
Tpr4g3723 883 Gene3D - 595 883 IPR036397 GO:0003676
Tpr4g3723 883 Gene3D - 416 589 - -
Tpr4g3723 883 PANTHER PROTEIN ARGONAUTE 10 18 882 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3723 Tpr-Chr4 43128644 43138895 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3723 30 883 Eukaryotic Initiation Factors Gene Family AT5G43810 70.267 0.0 1308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3723 K11593 - gmx:100808457 1469.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3723 4 43128644 43138895 Tpr4g3723 4 43128644 43138895 ECH