Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3718 ATGGAGTGTAAAAATAGTATCACAGTTCCTGGCTTGAAGAATTCATTCACAAACGATTCGGATATTGTGGTTGATGTTTTAGATGAAGGATTCGAGGTTGGTTGGAGTGGTGTGGGAGAAGACGAATGTGATGGTTGCATTAAATCTGGTGGGAGATGTGGATACAATACATCAGAAAATGCAACTATCTGTCTCTCGCCGGAGAAATCTGTGGCACCAATAGACGGAGTAACACCATCAACCGCTATTGCAGGTAAGCAGTTGAGCAGACAAGGGAAAATAAAAATCATTATAGGTGCAGTATTTGTAGCATTATCCGTATGTATCACAATCTTTTGCTTCAAATACAAGTCAACAAAAAATAACCAAGACATCGAAAAATTCTTAAAAACTCATGAACCCTTTCCTGTTAGAAGATACAAGTTCTCACATATCAAGAAAATGACCAACAACTTCAAAGTTGAATTAGGACAAGGTGGTTATGGTGCTGTATACAAAGGAAAGCTACTCGATGATCGCCCTGTGGCTGTAAAGATATTAAAGTCATCCAAAAGAAATGGGGAAGATTTTATGAATGAGGTTTCTAGCATTACTAAAACCTCTCATGTTAATGTTGTCACCCTTCTTGGATTTTGTTTCGAAGGCCGGAAAAAAGCTCTTATCTATGAATTAATGTCTAATGGTTCTCTTGACAAACTTATTTACAATAAAGGACCAGGAACCGTTCCATCTTTGAGTTGGGAGATTCTTTATCAAATTTCTAAAGGGATAGCTCGAGGGCTGGAGTACCTGCATAGAGGATGTAGCATTCAAATTTTACATTTTGATATCAAGCCACATAATATTCTCTTGGATGAGAATTTTTGTCCAAAGATATCAGATTTTGGGATGGCAAGACTTTGCCCGAAGAAAGAGAGCATTATTTCGATGTCAGGTGCTAGAGGGACAATGGGATATGTAGCTCCTGAGCTGTGGAATAAAAATTTTGGACGAGTTTCACACAAGTCTGATGTTTATAGTTACGGAATGATGTTGTTGGAAATGGTTGGAGGGAGGAAAAACCTTCGTGCTGATGCAAGTCACACAAGTGAGATATACTTTCCTTATTGGGTGTACAGTAGACTTGATCTAGGCGGTTATTTAAGACCGGGCGAAGTCATTGCCTCAGAAGAAGATGAGATCGCAAAGAGAATGACCGTTGTAGGTTTATGGTGCATTCAAACATTTCCAAATGATAGGCCTACAATGAGTAGAGTGATTGAAATGTTAGAATGCAACATGAATTCATTGGAAATACCACCAAAACCTGTTCTTTCGTCTCCTACTAGATCAGTACCAAAATCTCCAGCTTCATGA 1356 0.3864 MECKNSITVPGLKNSFTNDSDIVVDVLDEGFEVGWSGVGEDECDGCIKSGGRCGYNTSENATICLSPEKSVAPIDGVTPSTAIAGKQLSRQGKIKIIIGAVFVALSVCITIFCFKYKSTKNNQDIEKFLKTHEPFPVRRYKFSHIKKMTNNFKVELGQGGYGAVYKGKLLDDRPVAVKILKSSKRNGEDFMNEVSSITKTSHVNVVTLLGFCFEGRKKALIYELMSNGSLDKLIYNKGPGTVPSLSWEILYQISKGIARGLEYLHRGCSIQILHFDIKPHNILLDENFCPKISDFGMARLCPKKESIISMSGARGTMGYVAPELWNKNFGRVSHKSDVYSYGMMLLEMVGGRKNLRADASHTSEIYFPYWVYSRLDLGGYLRPGEVIASEEDEIAKRMTVVGLWCIQTFPNDRPTMSRVIEMLECNMNSLEIPPKPVLSSPTRSVPKSPAS* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3718 451 Pfam Protein tyrosine and serine/threonine kinase 153 423 IPR001245 GO:0004672|GO:0006468
Tpr4g3718 451 Gene3D Transferase(Phosphotransferase) domain 1 225 432 - -
Tpr4g3718 451 ProSiteProfiles Protein kinase domain profile. 150 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g3718 451 PANTHER RUST RESISTANCE KINASE LR10-RELATED 91 450 IPR045874 GO:0004672
Tpr4g3718 451 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 91 450 - -
Tpr4g3718 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Tpr4g3718 451 Gene3D Phosphorylase Kinase; domain 1 112 224 - -
Tpr4g3718 451 SUPERFAMILY Protein kinase-like (PK-like) 130 424 IPR011009 -
Tpr4g3718 451 Pfam Wall-associated receptor kinase C-terminal 2 68 IPR032872 -
Tpr4g3718 451 SMART serkin_6 150 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g3718 451 ProSitePatterns Protein kinases ATP-binding region signature. 156 178 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3718 Tpr-Chr4 43095543 43099364 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3718 3 447 Receptor kinase-like Gene Family AT5G38260 42.950 7.74e-129 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tpr4g3718 PK_Tyr_Ser-Thr 5.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3718 - - gmx:102665158 604.749