Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3705 ATGGAAGACAGAAAAGTACACACGATTGCTGTTATATCAGTAATATCCTTAATAATAGTGATAATCATTTGTCGTGTTTCCTTAAAACTCTCAAAAGCTTTCTTCTTAATCTGCGGCGCATCAATCGCAATAATTCTTGCTGTCTTTTCATGTTTACTCATAAGACAACGTTACAACAACAGAAGAAAAGTGTTGGAATCACAGTTAAAATCAGAAGGTCGTGAGCTTAGAATTGAGTACAGTTTCTTAAGAAAAATTGCAGGAGTACCAACAAAATTTCGATACAAAGAGCTCGAAGAAGCAACCGATGATTTTCAAGCAGTAATCGGTAAAGGGTCATCAGGTTCAGTCTTCAAAGGCATTTTGAATGATGGAACTTCAGTTGCAGTGAAAAGAATTAATGGTGAAGAAAGAGGTGAGAGAGAATTTAGATCAGAAGTTTCAGCTATTGCTAGTGTTCAGCATGTTAATCTTGTGAGACTTTTTGGTTATTGTAATTCACCAACACCACCAAGATATCTTGTTTATGAGTTTATTCCAAATGGTTCATTAGATTGTTGGATTTTTCCTATGAAACAAACAACTACAAGGACACGTAGATGTGGTTGTTTACCTTGGAATTTAAGGTATAATGTTGCTATTGATGTTGCTAAAGCATTAAGTTATCTTCATCATGATTGTAGATCTAGAATTTTGCATCTTGATGTGAAACCAGAGAATATATTACTTGATGAAAATTATAAAGCACTTGTTACTGATTTTGGTCTTTCAAAGCTTGTTGGAAAAGATGAGAGTCAAGTTATGACAACAATAAGAGGAACTAGAGGATATTTAGCACCAGAATGGTTATTGGAACGTGGAATTTCTGAGAAAAGTGATATTTATAGTTATGGAATGGTTTTGTTAGAGATGATTGGAGGTAGAAGAAATGTTTCTAAAGTTGAAGATCCTAGAGATAAGAGTAAGAAGAAGTGGGAATTTTTTCCTAAGATTGTGAATGAGAAATTGAGAGAAGGGAAATTGATGGAAATTGTGGATAAAAGGGTAGTGGAAAGTGGGAATTTTGATGAGAATGAAGTGAAAAGATTGGTGTTTATTGGTTTATGGTGTATACAAGAGAAACCAAGGTTGAGGCCTAGTATGGTTGAAATTGTTGATATGCTTGAAGGAAGAGTGAGTGTGGAAGAGCCACCAGGTACTAGAATGATTCTTGTTGATATGTTAGCTGATGATGAAGATCCTACAGATCATAATAATCTAGCTAGGTTATTGACTCCTATGTCTAGTAATGTTGATTGTACCTCTACTTACTCTTTAGGATCCTATATGTCTATTTTCTCTGGTAGATAA 1350 0.3444 MEDRKVHTIAVISVISLIIVIIICRVSLKLSKAFFLICGASIAIILAVFSCLLIRQRYNNRRKVLESQLKSEGRELRIEYSFLRKIAGVPTKFRYKELEEATDDFQAVIGKGSSGSVFKGILNDGTSVAVKRINGEERGEREFRSEVSAIASVQHVNLVRLFGYCNSPTPPRYLVYEFIPNGSLDCWIFPMKQTTTRTRRCGCLPWNLRYNVAIDVAKALSYLHHDCRSRILHLDVKPENILLDENYKALVTDFGLSKLVGKDESQVMTTIRGTRGYLAPEWLLERGISEKSDIYSYGMVLLEMIGGRRNVSKVEDPRDKSKKKWEFFPKIVNEKLREGKLMEIVDKRVVESGNFDENEVKRLVFIGLWCIQEKPRLRPSMVEIVDMLEGRVSVEEPPGTRMILVDMLADDEDPTDHNNLARLLTPMSSNVDCTSTYSLGSYMSIFSGR* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3705 449 Gene3D Transferase(Phosphotransferase) domain 1 179 397 - -
Tpr4g3705 449 PANTHER RECEPTOR-LIKE KINASE 1 449 - -
Tpr4g3705 449 Gene3D Phosphorylase Kinase; domain 1 66 178 - -
Tpr4g3705 449 ProSiteProfiles Protein kinase domain profile. 103 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g3705 449 Coils Coil 55 75 - -
Tpr4g3705 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Tpr4g3705 449 SUPERFAMILY Protein kinase-like (PK-like) 85 389 IPR011009 -
Tpr4g3705 449 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1 449 - -
Tpr4g3705 449 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
Tpr4g3705 449 Pfam Protein kinase domain 107 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g3705 449 SMART serkin_6 103 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3705 Tpr-Chr4 42950958 42952781 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3705 1 400 Receptor kinase-like Gene Family AT5G20050 66.418 0.0 524
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Tpr4g3705 Pkinase 8.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3705 - - gmx:100779485 728.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3705 4 42950958 42952781 Tpr4g3705 4 42950958 42952781 ECH