Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr4g3693 | ATGGCTCATCCACACCACATTCCAACCTCTAGGATGTCACCACCCCGTTTCGCCACAAACAGTGATGCCATTGAGGTGGGGCCTCAATTCCCAGTGATCAATGACCGCACTGAGCAACATTCAGGTTTTGAGCAACAGTCCTTCAAGAGGGCAAGAATGATTGGTAACAATCGTTCTGATGCATTTCCGTGCCCTCCTCCTAGGGTGATGCAGCCTCCACCTCAATTGAACAGAGGAACTGGCCACATTTTCTACAAGACCCGCACTTGTACCAGGTTCTCGTTCGGCAATTGTAGGAACGGTGACAATTGCAACTTTGCTCACGGGGAGGAGGAGCTAAGGCAGCCACCACCAAACTGGCAAGACTATGTTGGACCGCGCAACGCACCCAAGGAGGATCGTGTGCAGGTAGGGAACTGGGATGATGATCAAAAAATCATCCAGAAGATGAAGCTGTGTAAGAAGTTTTACAATGGTGAGCAATGTCCTTATGGTGAGAAGTGTAGTTTTCTTCATGAAGATCCTGCTAAGTTTAGGGCTGATTCTTGGAAATCAAGAGAGTGTTCTGCAATAAGCATTGGGACTGTTGGTTCCCCAAAGTCTTTTGGGGATGGTTCTGATAACTTGGAAGGCAATAGTGGTGTGACAAAGCAACCAAGGGGCACTTATTGGAAGACTAAGCTGTGTACCAAGTGGCAGAATACTGGAAGCTGTCCCTTTGGTGATGACTGTCACTTTGCTCATGGAGAAGCAGATTTACAAGCTCCTGGTGGAGGCATTGAAGCTGAAGCTGCAGTTGCCATAGCAAATACTACAAAAGCTCCCGTTCCAGCTTCACCAAAAGCCTTGTCAGTTTCTGTTGCCAATGTTGAACCTGTTGCCCTCCCAGCAAGTCTACCTGTAGCAATGGAGGTGGAAATGGATGAGAAAGCTAAGAAGATCTTGTCAAGATCCAGATTAAAGAACAAGAAGTTGTTTGGCCTTTATGCTGACTGGATCAATGACATAGGTCCTCTTCCCAATCCCAACTATCCAAGTCCAATGGAAAATTAA | 1053 | 0.4691 | MAHPHHIPTSRMSPPRFATNSDAIEVGPQFPVINDRTEQHSGFEQQSFKRARMIGNNRSDAFPCPPPRVMQPPPQLNRGTGHIFYKTRTCTRFSFGNCRNGDNCNFAHGEEELRQPPPNWQDYVGPRNAPKEDRVQVGNWDDDQKIIQKMKLCKKFYNGEQCPYGEKCSFLHEDPAKFRADSWKSRECSAISIGTVGSPKSFGDGSDNLEGNSGVTKQPRGTYWKTKLCTKWQNTGSCPFGDDCHFAHGEADLQAPGGGIEAEAAVAIANTTKAPVPASPKALSVSVANVEPVALPASLPVAMEVEMDEKAKKILSRSRLKNKKLFGLYADWINDIGPLPNPNYPSPMEN* | 351 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr4g3693 | 350 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 85 | 110 | IPR000571 | GO:0046872 | |
Tpr4g3693 | 350 | Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) | 224 | 250 | IPR000571 | GO:0046872 | |
Tpr4g3693 | 350 | Gene3D | - | 147 | 176 | - | - | |
Tpr4g3693 | 350 | Gene3D | - | 79 | 115 | - | - | |
Tpr4g3693 | 350 | Gene3D | - | 216 | 255 | - | - | |
Tpr4g3693 | 350 | PANTHER | CCCH ZINC FINGER/TIS11-RELATED | 15 | 338 | IPR045877 | GO:0003729 | |
Tpr4g3693 | 350 | SUPERFAMILY | CCCH zinc finger | 82 | 115 | IPR036855 | GO:0046872 | |
Tpr4g3693 | 350 | PANTHER | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 39 | 15 | 338 | - | - | |
Tpr4g3693 | 350 | SUPERFAMILY | CCCH zinc finger | 147 | 174 | IPR036855 | GO:0046872 | |
Tpr4g3693 | 350 | ProSiteProfiles | Zinc finger C3H1-type profile. | 223 | 251 | IPR000571 | GO:0046872 | |
Tpr4g3693 | 350 | ProSiteProfiles | Zinc finger C3H1-type profile. | 84 | 111 | IPR000571 | GO:0046872 | |
Tpr4g3693 | 350 | SUPERFAMILY | CCCH zinc finger | 222 | 254 | IPR036855 | GO:0046872 | |
Tpr4g3693 | 350 | SMART | c3hfinal6 | 223 | 250 | IPR000571 | GO:0046872 | |
Tpr4g3693 | 350 | SMART | c3hfinal6 | 84 | 110 | IPR000571 | GO:0046872 | |
Tpr4g3693 | 350 | SMART | c3hfinal6 | 147 | 174 | IPR000571 | GO:0046872 | |
Tpr4g3693 | 350 | Pfam | CCCH-type zinc finger | 151 | 172 | IPR041367 | - | |
Tpr4g3693 | 350 | ProSiteProfiles | Zinc finger C3H1-type profile. | 147 | 175 | IPR000571 | GO:0046872 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr4g3693 | Tpr-Chr4 | 42842583 | 42845538 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr4g3693 | 225 | 254 | C3H Transcription Factor Family | AT1G68200 | 63.333 | 3.42e-08 | 52.4 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C3H | Tpr4g3693 | zf-CCCH | 4.8e-11 | CL0537 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr4g3693 | - | - | aprc:113846184 | 370.548 |