Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3671 ATGGGTGCCTATATTGCAACTATCACCTTCCTGCTGTTCATGTCCTTATCATTACCAAATACAGTAGCTCAAACAAAACCACAACTACTAGAGCGGATAGCACCGGGTTCCTCACTTTCCCCCCATAGTAGTGATTACAACTCTATGTGGATTTCTCCTTCCTGCCTATTTGCTTTTGGCTTTTATCCACAAGGCAACAATGGTTTTGTCGTTGGGATTTGGTTGATTGGCAAGATAAACAACACACTAGTATGGACTGCAAACCGGGATGATCCTCCAGTAACCTCAACTGCAAAGCTACAATTCACCGTTAATGGTACAATAATACTAACAGATCAACAGGGACAAGGGAAGCTTATTGTTAATGCTAATACAAGAGCTTCCTCTGCCTCCATGCTTGATTCTGGGAACTTTGTACTATACAGCGACAATAATAATTCAAGGATCATATGGCAGAGTTTCGATCACCCAACTGATACTTTGTTAGGGAGTCAATCTCTACCATGTGGAGGCCAACTGTCCTCTAGTTTGTCAGAGACCAATTACTCAACCGGAAGGTTTCATCTCAACATGCAAGTTGATGGAAATCTTGTTCTGTATCCAGCATACACAACAGAAACAGTTTGGGATGCTTATTGGGCGTCAGATACTAATGGTGTCAATGTCAAATATCATCTTTACCTCAACAATACAGGATTACTGCAGATCTTGAATAGCAGCCGTGATTATGACCTTATTAAAACTTTGATTCATGCTGAAGAAAACCAAAATACTGGACGACACCAGACTGTTTATCGTGCAACCCTCGATTTTGATGGGTTTTTTCGGCTGCATGCTCATTATGTTAACAATGGCAGTGACAAAATTATAGCAGGTTTTCCAACAAGCAGCAGGACATGTGCAGTAAAAGGGTTTTGTGGCTTCAACAGCTACTGCACATTCGATGACAACAAACAATTGTGCAAGTGTCTCTCTGGTTATAAATATATAGATGAAAATGAAAAGACTCTTGGCTGTGAAAGGAACTATTCAAAAGTAGAGTGTAGAGGTGACAAAGATGGTTTGACCTTTTATAACATGGTCCTGATGAACAATATTGTATGGAAGGACCATCCTTATTTTAAAGATGACAAGATGCCAACAGAAGAAGCATGCTCATTGGCTTGTTTGGTTGATTGCAACTGTTGGGCTGCAAAGTATGAATCTGGAAGCTGCACGAAACAAGGACTGCCTTTGAGATATGTCAAACGAACATATGAAGCTTACGATTCTACCACGACTTTCATAAAGGTTGGAAACAACAGCATCCAAAACTCAGAGGAGCATGAAAACCCTTATGCTTTTCCCCTTCCAATCAAGAGTACAAGTAACAAAGCAATAGTGCATATTATTGTTGTTACTTTGGTACTTAGCATCGTTTTGTGTTCAGGTATGTTTATATCCATCCATTACATGTACAAGATTCGTGTACTAAAGTATAAAAGGCTAACAGAAACTGGGAACTTTGGAGGGTTGAATGAAGATTTGGCTTTGAGAAGATTTACATACAATGAGCTGAGAAGAGCAACAAATCATTTTAAGGAAGAGTTGGGTAAGGGAGCTTTTGGAAAAGTTTACAAAGGAGCCTTAAACAAAGGCAATAGATTGATTGCAGTAAAGAGACTGGAGAAGTTAGTGGAAGAAGGAGAGAGGGAGTTTCAAGCAGAAGTGAGAGCCATTGGGAAAACCCACCACAGGAACCTAGTTAGATTACTTGGTTTCTGTTCTGAGGGTTCTAAAAGGCTTCTGGTTTATGAATACATGAGCAATGGTTCACTTGGAAAGCTTCTGTTTGGTGGTCAAAGACGTCCGGGTTGGGATGAAAGAGTAAGAATAGCACTGGATATTGCTAGAGGGATCTCGTATCTCCATGGAGAGTGTGAGGCATCAATCATTCACTGTGACATAAAGCCTCAAAATATTTTGATGGATGAGTTTTGGACTGCCAAGATATCTGATTTTGGTCTTGCAAAACTTCTAATGCCGGACCAAACCAGAACTTTCACAGTGATTAGAGGGACAAGAGGCTACATGGCTCCAGAGTGGAACAAGAACACCCCAATATCACTGAAGGCAGATGTTTATAGCTATGGAATAATGCTGTTGGAGATTCTATGTTGCAGAAGAAACCTAGATGTTAATGTGTTGGAACCTGAGGAGATTCTTCTCTCTGGTTGGGCTTATAAGGTTTTTGTTGTAGGAGAGGTAAGTAAGCTTGTTCCTTGGGAAGTCATCGATAAAGATGTCCTGGAAAATATGGTTAATGTGGCACTTTGGTGTATCCAAGATGACCCTTTTCTCAGGCCAACAATGAAGGGTGTGGTGTTGATATTAGAAGGAGTTACTGATATAGCAATTCCTCCATGTCCAGTTTCCAATTCTGCCTGA 2427 0.4046 MGAYIATITFLLFMSLSLPNTVAQTKPQLLERIAPGSSLSPHSSDYNSMWISPSCLFAFGFYPQGNNGFVVGIWLIGKINNTLVWTANRDDPPVTSTAKLQFTVNGTIILTDQQGQGKLIVNANTRASSASMLDSGNFVLYSDNNNSRIIWQSFDHPTDTLLGSQSLPCGGQLSSSLSETNYSTGRFHLNMQVDGNLVLYPAYTTETVWDAYWASDTNGVNVKYHLYLNNTGLLQILNSSRDYDLIKTLIHAEENQNTGRHQTVYRATLDFDGFFRLHAHYVNNGSDKIIAGFPTSSRTCAVKGFCGFNSYCTFDDNKQLCKCLSGYKYIDENEKTLGCERNYSKVECRGDKDGLTFYNMVLMNNIVWKDHPYFKDDKMPTEEACSLACLVDCNCWAAKYESGSCTKQGLPLRYVKRTYEAYDSTTTFIKVGNNSIQNSEEHENPYAFPLPIKSTSNKAIVHIIVVTLVLSIVLCSGMFISIHYMYKIRVLKYKRLTETGNFGGLNEDLALRRFTYNELRRATNHFKEELGKGAFGKVYKGALNKGNRLIAVKRLEKLVEEGEREFQAEVRAIGKTHHRNLVRLLGFCSEGSKRLLVYEYMSNGSLGKLLFGGQRRPGWDERVRIALDIARGISYLHGECEASIIHCDIKPQNILMDEFWTAKISDFGLAKLLMPDQTRTFTVIRGTRGYMAPEWNKNTPISLKADVYSYGIMLLEILCCRRNLDVNVLEPEEILLSGWAYKVFVVGEVSKLVPWEVIDKDVLENMVNVALWCIQDDPFLRPTMKGVVLILEGVTDIAIPPCPVSNSA* 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3671 808 Pfam D-mannose binding lectin 82 166 IPR001480 -
Tpr4g3671 808 ProSitePatterns Serine/Threonine protein kinases active-site signature. 644 656 IPR008271 GO:0004672|GO:0006468
Tpr4g3671 808 ProSiteProfiles Protein kinase domain profile. 524 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g3671 808 CDD B_lectin 42 157 IPR001480 -
Tpr4g3671 808 SUPERFAMILY alpha-D-mannose-specific plant lectins 180 241 IPR036426 -
Tpr4g3671 808 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE LECRK1 26 806 - -
Tpr4g3671 808 SMART blect_4 40 157 IPR001480 -
Tpr4g3671 808 ProSiteProfiles Bulb-type lectin domain profile. 30 153 IPR001480 -
Tpr4g3671 808 PANTHER RUST RESISTANCE KINASE LR10-RELATED 26 806 IPR045874 GO:0004672
Tpr4g3671 808 Pfam Protein kinase domain 526 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g3671 808 Gene3D Phosphorylase Kinase; domain 1 492 600 - -
Tpr4g3671 808 ProSitePatterns Protein kinases ATP-binding region signature. 530 553 IPR017441 GO:0005524
Tpr4g3671 808 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 209 IPR036426 -
Tpr4g3671 808 Gene3D - 169 286 IPR036426 -
Tpr4g3671 808 SMART serkin_6 524 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g3671 808 Gene3D - 30 156 IPR036426 -
Tpr4g3671 808 CDD STKc_IRAK 530 793 - -
Tpr4g3671 808 Coils Coil 552 572 - -
Tpr4g3671 808 PIRSF SRK 2 808 IPR024171 GO:0004674
Tpr4g3671 808 SUPERFAMILY Protein kinase-like (PK-like) 509 791 IPR011009 -
Tpr4g3671 808 Gene3D Transferase(Phosphotransferase) domain 1 601 798 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3671 Tpr-Chr4 42678272 42682929 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3671 511 793 Receptor kinase-like Gene Family AT1G60800 43.493 1.57e-65 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Tpr4g3671 Pkinase 2.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3671 - - ahf:112707609 977.237