Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3669 ATGGCAACCATACTTGTTCTGCTATTATTACTGTTCTTGTTTACATTAACAGAACCCAGCACACACGCTATAACTCCAAAATATAACTCCAGTATCATTCCGTTGGGGTCATGGCTCTCTCCTGAAGGTGAACATACTTCATGGCCATCAAGTTCTGGCCATTTTGCTTTCGGGTTTTACCCACACGGTAATGGTTTTGCTGTTGGAATATGGTTGGTTAATCCGTCTGAAAACACAACCACTGTTGTTTGGACTGCTAACCGTGATGCTCGAGCAGTCTCCTCTAAATCTATGTTGAATTTGACCAAGCAAGGCCTGCTTCTTCAAAATGGAAAGGGAGATTCACCCATCAATATAGTCTCCAGAGATACAGAGTTGGTCTATATGGCATCTATGCTAAATTCTGGAAACTTTGTGCTTTATTATGAGGATTCTTCCGTTGTCTGGCAAAGCTTTGATCAGCCAACTGACACCATATTAGGAGGTCAGAATTTGACAGAGGATGATTCTTTAATCTCTAGTATGTCCAAATCAGACCATTCGCGTGGTCGTTTCTATCTCAAAGTGAAAAGTGATGGAAACCTTGTCGCTTACCATTATTACAGCTCCGCAAATGATGTGGATGCTTACGGGGAGTGGGACCAACAAAGCTTTCTTTGCAAAATTGAACCTGAAAATAATGGACGCGGGCCAGTATGCCCGTCCAACAGGGTGTACACGAGTTGCATAGGTAACTATAGTACCCGTTCTGTTCTTCCTACAAGACCTCGTTATAGGTTATGTTTCAACAATAGCAATAAGCCTGGAAAGAAGTTACACGAGAACATCACATCAATCTACCGTGCAACACTAGACGTAGATGGAAACTTGAGATTGTATGAGCACCAATTTCACTTTGAGCAGGGCACCAATAGCTCTCGCGTGGTAATGTTGAAGCAGGCACTTAATGATACATGTCTAGTGAAGGGATTTTGTGGGTTGAACAGTTATTGCTCCTCCAACATGAGTGGTGATGCTGCCTGCAAGTGTTATCCTGGTTTCATCCCATCCAAGACTAAAAGTAGTACTAACATGCCTATGGACTGTGTACAGATGCTTAGCAAAGATGATTGTGAAATAAATAAAGATCGACTGTTGTTGTATAATTTTACTCACTTTAGGAATATGACTTGGGGTGATATTCCATATTCTGTTATACCCGTGTTGATGATGGAAACTTGTGAGAAGGCTTGCCAACAGGATTGTGTTTGCGGGGGAGCAATATATACAAACAATAGCTGCAATAAATATAGGCTTCCACTTATTTATGGCAGGGTTCAAAATGATTCTTCCACTGTGTCTGTGGCCCTATTAAAGATTCCTTCTTCAACAATTGCCATTATTCCACCTCCAACCTCAAACGACACTAAGCCCAAGGTTGTTGCTGACAACAAGAGAAGTCTGATAATGATCTTATCTATTACTTTGGGTGTTGTTTCATTGATTTGCTTGGCCTTTGCATTGTCCATTTTCTTCACTTACAGGCATCAAGTTAATAGGTATGCAATGTTGTCTGAAAGTGAAAAACTTGATTTTACAGAAGAGTGTTCCTTGCGTTCATTTTCTTTTGAAGAACTTGCAAAATCAACTGGGGGATTTTCAGAAGAGATAGGGAGAGGATCATTTGGAGCTGTTTATAAAGGTAAAATAGGCAACAATAACAGAAGTATTGCCGTGAAGAAACTGGAGGAGAAAATTGATGATGAAGGGGAGAGAGAATTCCAAGCAGAAATTACTGCTATTGCTCGAACTCATCATAGAAATTTGGTTAAGCTTATTGGTTTTTGCATAGAAGGATCCAAGAAGCTTCTTGTTTATGAATTTGTCAGCAAAGGATCTCTTGAAAAGCTCCTCTTTTACGGGGAAACGAGACTATCATGGAAAGAGAAAATGAAACTTGCATTGGACGTGGCTAGTGGTCTGCTGTATCTACATGAGGAGTGTGAAGTCCGAATCATCCATTGCAATATAAATCCTCGAAACATACTCATGGATGAAGCATGGACTGCAAAAATATCTGATTTTGGATTGGCAAGGTTCATAAGGAGGGGTCATTCAAGAACCAAAATAGGAGATGATGGCACAAGCAGGTACTTGGCACCCGAATGGCAGAAGGAGGATGCATCAATATCAGTAAAAGCTGACATATATAGTTTTGGGGTGGTACTACTGGAGATTATTTGCCACAGAAAAAGTATAGAGATGAATAATATTTCCTCGGCTGATGAAATCCTTCTCTCCAATTGGGCATATCAATGTTTTGCATCTGGACAATTAAACAAGCTAATTGCACATGATGAAAATGATGTAGATTGGAAGATATTGGAAATATTGGTGAAAGTCGGATTGTGGTGTGTGCAAGACCAACAATCTCTCCGTCCTGCAATGAAGAATGTAATATTGATGTTGGAAGGTTTGAAAGATATTCCAGTTCCTCCCTCTCCAGCTCGCTTGGTTGAGTAG 2502 0.4041 MATILVLLLLLFLFTLTEPSTHAITPKYNSSIIPLGSWLSPEGEHTSWPSSSGHFAFGFYPHGNGFAVGIWLVNPSENTTTVVWTANRDARAVSSKSMLNLTKQGLLLQNGKGDSPINIVSRDTELVYMASMLNSGNFVLYYEDSSVVWQSFDQPTDTILGGQNLTEDDSLISSMSKSDHSRGRFYLKVKSDGNLVAYHYYSSANDVDAYGEWDQQSFLCKIEPENNGRGPVCPSNRVYTSCIGNYSTRSVLPTRPRYRLCFNNSNKPGKKLHENITSIYRATLDVDGNLRLYEHQFHFEQGTNSSRVVMLKQALNDTCLVKGFCGLNSYCSSNMSGDAACKCYPGFIPSKTKSSTNMPMDCVQMLSKDDCEINKDRLLLYNFTHFRNMTWGDIPYSVIPVLMMETCEKACQQDCVCGGAIYTNNSCNKYRLPLIYGRVQNDSSTVSVALLKIPSSTIAIIPPPTSNDTKPKVVADNKRSLIMILSITLGVVSLICLAFALSIFFTYRHQVNRYAMLSESEKLDFTEECSLRSFSFEELAKSTGGFSEEIGRGSFGAVYKGKIGNNNRSIAVKKLEEKIDDEGEREFQAEITAIARTHHRNLVKLIGFCIEGSKKLLVYEFVSKGSLEKLLFYGETRLSWKEKMKLALDVASGLLYLHEECEVRIIHCNINPRNILMDEAWTAKISDFGLARFIRRGHSRTKIGDDGTSRYLAPEWQKEDASISVKADIYSFGVVLLEIICHRKSIEMNNISSADEILLSNWAYQCFASGQLNKLIAHDENDVDWKILEILVKVGLWCVQDQQSLRPAMKNVILMLEGLKDIPVPPSPARLVE* 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3669 833 Gene3D Phosphorylase Kinase; domain 1 517 621 - -
Tpr4g3669 833 Gene3D - 29 152 IPR036426 -
Tpr4g3669 833 PIRSF SRK 1 833 IPR024171 GO:0004674
Tpr4g3669 833 Pfam D-mannose binding lectin 81 168 IPR001480 -
Tpr4g3669 833 ProSitePatterns Protein kinases ATP-binding region signature. 550 574 IPR017441 GO:0005524
Tpr4g3669 833 SUPERFAMILY Protein kinase-like (PK-like) 527 817 IPR011009 -
Tpr4g3669 833 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 201 IPR036426 -
Tpr4g3669 833 PANTHER S-RECEPTOR KINASE-LIKE PROTEIN 1 831 - -
Tpr4g3669 833 ProSiteProfiles Protein kinase domain profile. 544 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g3669 833 ProSiteProfiles Bulb-type lectin domain profile. 30 153 IPR001480 -
Tpr4g3669 833 Gene3D Transferase(Phosphotransferase) domain 1 622 822 - -
Tpr4g3669 833 Pfam Protein tyrosine and serine/threonine kinase 546 746 IPR001245 GO:0004672|GO:0006468
Tpr4g3669 833 SMART blect_4 39 155 IPR001480 -
Tpr4g3669 833 Gene3D - 153 219 IPR036426 -
Tpr4g3669 833 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 831 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3669 Tpr-Chr4 42635531 42639326 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3669 400 828 Receptor kinase-like Gene Family AT5G38280 32.960 2.55e-63 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Tpr4g3669 PK_Tyr_Ser-Thr 4.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3669 - - cam:101496142 1196.03