Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr4g3657 | ATGTCAAACTGCAGCATAGATGTTGCACCTGCTGAGCAACTTTGCTACATCCCTTGCAACTTTTGCAATATTGTTCTTGCGGTGAGTGTTCCATGCAGTAGCTTGTTTGACATAGTGACCGTTCGATGTGGTCACTGCACAAATCTATGGTCTGTGAACATGGCCGCCGCGTTTCAGTCACTGTCATGGCAAGATGTTCAGGCACCTAGTCAGCAGGGCATGAATATTAATCCAGAGTATAGGATTAGAACTGCAGCTGGATCAGGTTCCAAATACAGCAACGATAGGATTGCAATGCGCACTACTACTGCACCACCACCAACCACTCAAGAAAGGGTTGTTAACCGCCCTCCCGAGAAGAGGCAGCGAGTACCTTCTGCTTATAACCAGTTCATAAAGGAAGAAATTCAGAGGATTAAGGCTAATAATCCTGATATTAGTCACAGAGAAGCTTTTAGTACTGCTGCCAAGAACTGGGCACATTTTCCTCATATTCATTTTGGACTCATGTTGGAGACCAACAATCAAGCTAAGATAGAGAATGTATCTGAGAAGCGTTTGATGTCAAGGGCTGCACTAATGAACAAATAA | 591 | 0.4416 | MSNCSIDVAPAEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSWQDVQAPSQQGMNINPEYRIRTAAGSGSKYSNDRIAMRTTTAPPPTTQERVVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLETNNQAKIENVSEKRLMSRAALMNK* | 197 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr4g3657 | 196 | PANTHER | PROTEIN YABBY 6-RELATED | 1 | 186 | IPR006780 | GO:0007275 | |
Tpr4g3657 | 196 | SUPERFAMILY | HMG-box | 105 | 162 | IPR036910 | - | |
Tpr4g3657 | 196 | Pfam | YABBY protein | 10 | 169 | IPR006780 | GO:0007275 | |
Tpr4g3657 | 196 | MobiDBLite | consensus disorder prediction | 101 | 124 | - | - | |
Tpr4g3657 | 196 | PANTHER | AXIAL REGULATOR YABBY 5 | 1 | 186 | - | - | |
Tpr4g3657 | 196 | Gene3D | High mobility group box domain | 108 | 185 | IPR036910 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr4g3657 | Tpr-Chr4 | 42468933 | 42473542 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr4g3657 | 7 | 179 | C2C2-YABBY Transcription Factor Family | AT2G26580 | 73.410 | 9.43e-86 | 248 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-YABBY | Tpr4g3657 | YABBY | 6.5e-72 | CL0114 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr4g3657 | K25796 | - | gmx:100499942 | 315.464 |