Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3657 ATGTCAAACTGCAGCATAGATGTTGCACCTGCTGAGCAACTTTGCTACATCCCTTGCAACTTTTGCAATATTGTTCTTGCGGTGAGTGTTCCATGCAGTAGCTTGTTTGACATAGTGACCGTTCGATGTGGTCACTGCACAAATCTATGGTCTGTGAACATGGCCGCCGCGTTTCAGTCACTGTCATGGCAAGATGTTCAGGCACCTAGTCAGCAGGGCATGAATATTAATCCAGAGTATAGGATTAGAACTGCAGCTGGATCAGGTTCCAAATACAGCAACGATAGGATTGCAATGCGCACTACTACTGCACCACCACCAACCACTCAAGAAAGGGTTGTTAACCGCCCTCCCGAGAAGAGGCAGCGAGTACCTTCTGCTTATAACCAGTTCATAAAGGAAGAAATTCAGAGGATTAAGGCTAATAATCCTGATATTAGTCACAGAGAAGCTTTTAGTACTGCTGCCAAGAACTGGGCACATTTTCCTCATATTCATTTTGGACTCATGTTGGAGACCAACAATCAAGCTAAGATAGAGAATGTATCTGAGAAGCGTTTGATGTCAAGGGCTGCACTAATGAACAAATAA 591 0.4416 MSNCSIDVAPAEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSWQDVQAPSQQGMNINPEYRIRTAAGSGSKYSNDRIAMRTTTAPPPTTQERVVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLETNNQAKIENVSEKRLMSRAALMNK* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3657 196 PANTHER PROTEIN YABBY 6-RELATED 1 186 IPR006780 GO:0007275
Tpr4g3657 196 SUPERFAMILY HMG-box 105 162 IPR036910 -
Tpr4g3657 196 Pfam YABBY protein 10 169 IPR006780 GO:0007275
Tpr4g3657 196 MobiDBLite consensus disorder prediction 101 124 - -
Tpr4g3657 196 PANTHER AXIAL REGULATOR YABBY 5 1 186 - -
Tpr4g3657 196 Gene3D High mobility group box domain 108 185 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3657 Tpr-Chr4 42468933 42473542 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3657 7 179 C2C2-YABBY Transcription Factor Family AT2G26580 73.410 9.43e-86 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Tpr4g3657 YABBY 6.5e-72 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3657 K25796 - gmx:100499942 315.464