Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3643 ATGAGTGAACAGGGAGCACACACAACAACAGCGGCAGCCTCCGACGTAGCATTTCTCAATGTTGAAGCTGCTCAGGAGATTGATCAGGTTCATGGTTCTTATGTATGTGGAGTTGTTAACAGTATCAATACATACCAGATGGAGTATGATCCTTACAGTAGATCTGGTAGATTACCTCAGTGCTTTGTTCGGGAGTTCGGTGACCTGATCGATGAACATGTAATTCTGCAGGATCCAAAACACAATGAGATTGAGGTCCGGGTTTTGAAAAAATGTAGTGAAATGTATTTTGAACAGGGATGGACCACTGTTAGGGATTTTTATCATATGTGGTTTGGAGGTTGGCTCAGTTTTAAGTATGTTAGTCCCAAGCTTCTGGCCATAACTCTCATGACAAGATGGGGTACTGAAGTTGTATATCCTTTCCATGATCCTCCCTTTAAGCAGTTATTGGCTACTGGAGGTGTTGACCCTAAAATTTGTTCAGCAACTCTCCCGCGAATTTCATCCAATCCTTTTGTGTTTCCGATGTCATTCCGCCGTTCTTACTTTAAGAGATTGACATCGTATGATGTTGAATCTGGAATTCTGGTTTTGCCATGGTATGGTTTTGGTGAATTCGCATTTGCATTTACTTTTAGCAAATTGGTATTGGTTGATCATACTGGATGTCGATATCCATGTAGCATACAATTCAGCGTTGATGACGAGGGTGAACTAGCTTGCAAGGTGTTTGGTTATTGGATGGAGTTCTGTAAAAAACATCAGCTGTTACAAGGTGACAGAATACGTTTCGCTGTCAACGAGCCTACACGGGATCATGTCCTCTATGCTTGTGTTTATCCTCAGATCGGAGTAGAAACCACTCTCAGTTACCCTTTGAACGATGGTTCTTATTTACCCTTGTATGTATCCCAGCAACATTTTGTAGTGCCGTTCTGA 942 0.4193 MSEQGAHTTTAAASDVAFLNVEAAQEIDQVHGSYVCGVVNSINTYQMEYDPYSRSGRLPQCFVREFGDLIDEHVILQDPKHNEIEVRVLKKCSEMYFEQGWTTVRDFYHMWFGGWLSFKYVSPKLLAITLMTRWGTEVVYPFHDPPFKQLLATGGVDPKICSATLPRISSNPFVFPMSFRRSYFKRLTSYDVESGILVLPWYGFGEFAFAFTFSKLVLVDHTGCRYPCSIQFSVDDEGELACKVFGYWMEFCKKHQLLQGDRIRFAVNEPTRDHVLYACVYPQIGVETTLSYPLNDGSYLPLYVSQQHFVVPF* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3643 313 SUPERFAMILY DNA-binding pseudobarrel domain 181 277 IPR015300 -
Tpr4g3643 313 Gene3D - 39 133 IPR015300 -
Tpr4g3643 313 SUPERFAMILY DNA-binding pseudobarrel domain 56 129 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3643 Tpr-Chr4 42298766 42303804 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3643 57 144 B3 DNA Binding Superfamily AT1G49475 27.273 9.11e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3643 - K03500 fve:105351752 57.7658