Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3641 ATGGAAGACAACAACAACAAGTGTGGATGTTGGTCTGTCCTCAAACGTGGTGTTTGTAAACCCTCAGCTTCTTCTACACACTCTCCTAACACTATCCCTCGTACTAGTGTTGTTCATGATGCAGCAACTGAGACGCGATACCTGAATGCTAGCAATCGAGAACTGTGTCCTCCGAATGAAGCTAGGCTCTCTTCTGATAATCCTGACCCCCCACCTCAGGAAAACAAGCCTCCTTGTCAGCTCCTTCAATTCACATTTCAAGAGCTGAAATCTGCAACTGGAAATTTCAGACCTGATAGCATTCTTGGTGAGGGTGGATTTGGTTATGTTTTTAAAGGATGGATTGAGGAAGGTGGAACTGCCCCGGCAAAACCTGGTTCAGGAGTTACGGTAGCTGTCAAAAGCTTGAAGCCAGATGGTCTTCAAGGCCATAGAGAATGGGTGGCTGAAGTTGATTTTCTTGGACAACTTCACCATCCCAACCTTGTGAAACTTATTGGTTACTGCATTGAAGATGATCAGCGGCTTCTTGTTTACGAGTTTATGACTCGTGGAAGTCTAGAGAATCATCTTTTCAGAAGAACCGTACCTCTTCCATGGTCCAACAGAGTGAAGATTGCACTTGGTGCTGCTAAAGGATTGGCTTTCCTCCATAATGGTCCAGAACCAGTCATTTACAGAGATTTCAAAACATCAAACATTTTGCTTGATACGGAGTATAATGCGAAGCTTTCAGATTTCGGTCTAGCAAAAGCAGGTCCTCAAGGAGACAAAACACATGTTTCTACTAGAGTTGTTGGAACTTATGGTTATGCTGCTCCAGAATATGTCATGACAGGACACTTAACTGCTAAGAGTGATGTTTATAGTTTCGGAGTTGTGTTACTCGAGATTTTAACAGGAAGAAGATCGATGGACAAGAAGCGTCCAAGTGGGGAACAAAATCTTGTTTCATGGGCTAGACCGTATTTAGCTGACAAGCGAAAACTTTACCAACTTGTTGATCCTCGCTTGGAACTAAACTATTCTTTAAAAGCTGTGCAGAAAATTGCTCAGTTAGCTTATAGTTGCCTCAGTAGAGACCCTAAATGTCGTCCAAACATGGACGAAGTTGTGAACGCTTTGACACCATTGCAGGATCTTAACGACTTTGCTATCTTGTCTTATCACTCTCGTTTATCTCAACAAGGGAGAAGAAAGAAGAAACCAGATGGAACTCCACATATCACTTATACACATTCCAAGAGCATGAGGGCTTCACCTTTGAATACCGGAAAACACCTACGATGA 1290 0.4287 MEDNNNKCGCWSVLKRGVCKPSASSTHSPNTIPRTSVVHDAATETRYLNASNRELCPPNEARLSSDNPDPPPQENKPPCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEEGGTAPAKPGSGVTVAVKSLKPDGLQGHREWVAEVDFLGQLHHPNLVKLIGYCIEDDQRLLVYEFMTRGSLENHLFRRTVPLPWSNRVKIALGAAKGLAFLHNGPEPVIYRDFKTSNILLDTEYNAKLSDFGLAKAGPQGDKTHVSTRVVGTYGYAAPEYVMTGHLTAKSDVYSFGVVLLEILTGRRSMDKKRPSGEQNLVSWARPYLADKRKLYQLVDPRLELNYSLKAVQKIAQLAYSCLSRDPKCRPNMDEVVNALTPLQDLNDFAILSYHSRLSQQGRRKKKPDGTPHITYTHSKSMRASPLNTGKHLR* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3641 429 Gene3D Phosphorylase Kinase; domain 1 78 181 - -
Tpr4g3641 429 MobiDBLite consensus disorder prediction 51 78 - -
Tpr4g3641 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Tpr4g3641 429 ProSitePatterns Protein kinases ATP-binding region signature. 102 134 IPR017441 GO:0005524
Tpr4g3641 429 Gene3D Transferase(Phosphotransferase) domain 1 182 392 - -
Tpr4g3641 429 SUPERFAMILY Protein kinase-like (PK-like) 77 383 IPR011009 -
Tpr4g3641 429 MobiDBLite consensus disorder prediction 393 429 - -
Tpr4g3641 429 PANTHER OS01G0588500 PROTEIN 76 395 - -
Tpr4g3641 429 Pfam Protein tyrosine and serine/threonine kinase 100 375 IPR001245 GO:0004672|GO:0006468
Tpr4g3641 429 CDD STKc_IRAK 102 378 - -
Tpr4g3641 429 PANTHER OS01G0588500 PROTEIN-RELATED 76 395 - -
Tpr4g3641 429 ProSiteProfiles Protein kinase domain profile. 96 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3641 Tpr-Chr4 42248328 42251601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3641 84 375 Glycoside Hydrolase AT3G07070 56.081 6.99e-112 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tpr4g3641 PK_Tyr_Ser-Thr 2.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3641 - - gmx:100785385 793.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3641 4 42248328 42251601 Tpr4g3641 4 42248328 42251601 ECH