Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3627 ATGATCATTTCCGAGAAAAATCGTAGAGAGATCTCCAAATACCTCTTCCAAGAGGGAGTTTGTTATGCAAAGAAGGATTACAATCTTGCAAAGCATCCAGATATTGATGTACCAAATCTGCAAGTGATTAAGCTCATGCAGAGCTTCAAATCAAGGGAATATGTTAGGGAAACTTTTGCTTGGATGCACTATTACTGGTTTCTTACCAATGATGGAATTGAGTTCCTTAGGACTTATCTCAATCTTCCATCTGAGATTGTGCCAGCTACTTTGAAGAAACAGGCTAAGCCAGCTGGCGCAAGGCCATTCGGCGGTGATCGCCCTAGGGGTCCACCTAGATTCGAGGGAGAAAGGAGATTCGGTGGTGACCGTGATGGTTATCGTGGAGGTCCTAGAGGACCTGGTGGTGAGTTTGGTGGAGAAAAGGGTGGAGCTCCAGCCGACTATAGACCTTCTTTCGGGGGTCCTGGTGGAAGACCTGGCTTTGGCCGTGGTTCTGGTGGCTTTGGAGCTCCAACTAGTTCCAATGATGCTTAA 537 0.4693 MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGARPFGGDRPRGPPRFEGERRFGGDRDGYRGGPRGPGGEFGGEKGGAPADYRPSFGGPGGRPGFGRGSGGFGAPTSSNDA* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3627 178 Gene3D - 1 104 IPR036388 -
Tpr4g3627 178 MobiDBLite consensus disorder prediction 108 126 - -
Tpr4g3627 178 PANTHER 40S RIBOSOMAL PROTEIN S10 1 176 IPR037447 -
Tpr4g3627 178 MobiDBLite consensus disorder prediction 93 178 - -
Tpr4g3627 178 Pfam Plectin/S10 domain 3 94 IPR005326 -
Tpr4g3627 178 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 1 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3627 Tpr-Chr4 42120782 42123151 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3627 1 153 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 75.484 4.03e-72 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3627 K02947 - gmx:100500445 214.927