Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3619 ATGGATGTAACTGTTTTGTTCTTGGTACTATTGTTGCAATTGTCAACAATTTTTGGGTCTGAAGTTGTGTTACAGACAAAGGATTGTGGCAATAATTTGGTAGCAAATTCATATTCTAGTCATGGTGAGGAGGTGTTTTACATAAATAGGAATGTTGTAAACAAAGTTGATTTCTGTAAAGCTCTTCAATTGTATATTGCAAATGGTTGTGATTTGAAGGACTACTTTGAAAGCAACAACTGTGTGTTGGATTTGGATGTTACTTTTGTGAATTTGCCTTCAAAAGGAGGAAGGAAACTTTTGCTAAAAGATTTAAACAATAATTCGACATCACAAGGAGAGTCTAAGTCTGTGTCAAGCAACCAAGTTGGAATTTTTGCAGGTGGAGCTTTGTTGGTATGTTGTGCTGTTGTCTGTCCTTGTTTCTATGGGAAGAGAAGGAAGGCAACTTCTCATGCTGTTCTTGAAAAGGACCCAAATTCAATGGATTTAGCTTCCTCATTTGAACCATCTGTTTCTGATAAGATTCCGGCTAGTCCACTTCGTGTTCCACCTAGTCCATCGAGATTCTCAATGTCTCCAAAACTCAGTAGACTTCAGTCATTACATCTCAACCTGAGCCAGGTTTCCAAAGCTACTCGTAATTTTTCAGAAACATTACAAGTTGGAGAAGGAGGTTTTGGAACTGTTTACAGGGCTCAATTAGATGATGGACTGGTCGTGGCTGTAAAACGTGCAAAAAGGGAACATTTTGAGAGTTTGAGAACAGAATTCAGCAGTGAAGTCGAACTTCTGGCCAAAATTGATCATCGAAACCTTGTGAAGCTACTTGGTTATATTGACAAAGGAAACGAACGTATCCTTATTACGGAGTTTGTGCCAAATGGTACTCTTCGAGAACATTTGGATGGTTTGCGTGGAAAAATTCTGGATTTCAATCAGCGCCTTGAAATCGCAATCGATGTTGCTCATGGATTGACCTATCTGCATCTGTATGCAGAAAAACAAATTATCCATCGAGATGTGAAATCATCCAACATTCTTCTGACTGAAAGCATGCGGGCTAAAGTCGCTGATTTTGGATTTGCAAAGCTTGGTCCCGTAAACAATGACCATACACACATATCTACCAAAGTGAAGGGAACAGTTGGTTATTTGGATCCTGAGTATATGAAAACATACCATCTCACTCCTAGAAGTGATGTTTACTCGTTTGGAATTTTGCTTTTAGAAATTCTGACTGGCCGTCGTCCTGTGGAGTTGAAAAAAAGTCCTGAAGAACGAGTTACATTAAGATGGGCCTTCAGGAAATATAATGAAGGAAGTGTGGTGGAACTGCTTGATCCTTTAATGCAAGAAGCTGTAAAAACAGATGTTGCTGTGAAGATGTTTGATTTGGCATTTAATTGTGCAGCACCAGTAAGAACAGATAGACCTGATATGAAAACAGTTGGGGAGCAATTGTGGGCAATAAGAGCAGATTACCTCAAGAGTAGTGCAAGTACAACTGCATGA 1515 0.3914 MDVTVLFLVLLLQLSTIFGSEVVLQTKDCGNNLVANSYSSHGEEVFYINRNVVNKVDFCKALQLYIANGCDLKDYFESNNCVLDLDVTFVNLPSKGGRKLLLKDLNNNSTSQGESKSVSSNQVGIFAGGALLVCCAVVCPCFYGKRRKATSHAVLEKDPNSMDLASSFEPSVSDKIPASPLRVPPSPSRFSMSPKLSRLQSLHLNLSQVSKATRNFSETLQVGEGGFGTVYRAQLDDGLVVAVKRAKREHFESLRTEFSSEVELLAKIDHRNLVKLLGYIDKGNERILITEFVPNGTLREHLDGLRGKILDFNQRLEIAIDVAHGLTYLHLYAEKQIIHRDVKSSNILLTESMRAKVADFGFAKLGPVNNDHTHISTKVKGTVGYLDPEYMKTYHLTPRSDVYSFGILLLEILTGRRPVELKKSPEERVTLRWAFRKYNEGSVVELLDPLMQEAVKTDVAVKMFDLAFNCAAPVRTDRPDMKTVGEQLWAIRADYLKSSASTTA* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3619 504 ProSitePatterns Protein kinases ATP-binding region signature. 222 244 IPR017441 GO:0005524
Tpr4g3619 504 Pfam Protein tyrosine and serine/threonine kinase 221 488 IPR001245 GO:0004672|GO:0006468
Tpr4g3619 504 ProSiteProfiles Protein kinase domain profile. 216 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g3619 504 PANTHER OS07G0166700 PROTEIN 11 495 IPR045272 GO:0004714|GO:0006468
Tpr4g3619 504 PANTHER NODULATION RECEPTOR KINASE-LIKE PROTEIN 11 495 - -
Tpr4g3619 504 Gene3D Phosphorylase Kinase; domain 1 187 292 - -
Tpr4g3619 504 SUPERFAMILY Protein kinase-like (PK-like) 197 491 IPR011009 -
Tpr4g3619 504 CDD STKc_IRAK 222 488 - -
Tpr4g3619 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 337 349 IPR008271 GO:0004672|GO:0006468
Tpr4g3619 504 Gene3D Transferase(Phosphotransferase) domain 1 293 502 - -
Tpr4g3619 504 SMART serkin_6 216 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3619 Tpr-Chr4 41998738 42004578 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3619 122 492 Receptor kinase-like Gene Family AT3G46290 39.050 3.46e-73 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Tpr4g3619 PK_Tyr_Ser-Thr 2.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3619 - - aprc:113845864 832.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3619 4 41998738 42004578 Tpr4g3619 4 41998738 42004578 ECH