Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3609 ATGTGTAAAACACGCAGCCCCCGCCATTCTATGAGGATGACTGAACCTGATGACAGTGATGTCAGAGATGATGAGTATATTGTGACTCTGGCATCTGACAGTGAAACCACCAACGAGGTAAACTTGTTGCCGCCTCCTGAAATACCAATTGGAATTGATATTGGCACATGGCCATGTTGTGTTGCGGTGTGGAATGGTTCCGATTTTGATCTTTTTAGCAACAAAACAAACGAGAACATTATGAAATCAGGTGAAATTTTCAAATTTGATAGCTCTTCTATTGGAGTTATTAGTACTAGTGAAGTCTCACTCTCCCAAGACCAAGTGCATGACATGTCGTATGAAGCTACAATTTACAACATGAGACGCTTGATAGGCAGAATTGATACAGATCCAGTAGTTCATGCAAGTAAAAATTTCCCATTTAGGGTGCAGACGTTGGACATTGGCGTTCACCCTTTAATTTCAGAAAAAATGACCGATGGCTGGAGATATACCACTGTAGAACACGTCCTTGCGGTATATCTGAGTCAACTAAGAGTATTGGCTGAAACTCAACTGAAACGGCCAGTAAGAAATGTTGTGTTTACGGTTCCAGTCTCATTCAATCGATTCCAGCTAAACCGGATATACTATGCTTGTGTGATGGCCGGTCTTGTTGTTCTCAAGCTAATGCCTCAACCAACAGCAGTGGCTTTGTTGTATGCGCAGCAACAACTGCAGGCTTCTTCTTCTTCTTCTTCTTCTTCTCATGAGGATATGGACAGTGAAAGCAACAAAATTGCTCTCATTTTCAATATGGATTCTGGTTATTGTGATGTTGCTGTGACTCTTGCTACAGAAAGAGAATGCCAAATGAAAGCCTTGGCAGGAAGTGCGATTGGTGGTGAAGATTTGCTTGGAAATCTGATGAATCATCTCTTACCAGATTCTAAAAATAAATTCAAAAAACATCTAGATGGGGACAAAGAAATTAAATCAATGAGTATACTTCGAGCAGCAACCCTGGAAGCGATTCATCGACTTTCCTCTCAGACTAGTGTTGAATTTGATTTAGACTTGGGAGATGGTTTGAAGATATGCAAGGTTGTGAAGCGGGAGGAGTTTGAGAAGATAAACAATGAGGTGTTTGAAAAGTGTGAAAGGCTAATCAAACAGTGCTTGCAAGATGCAAATGTAAAAGTTGAGGATATAAATGATGTTATAATTGTTGGTGAATGTTATCATATACCAAGGGTGAAGAATATTGTTACTAAAATATGTAAAGTAACAGAACTTTATAAAGGTATGGATCCTTTGACAGCTTCTGTTTGTGGTGCAGCCGTGGCAGGAGCTATTGCTCCAGCCATTCATCACACCTCTGGGAACTTGGACTTGTTAACTTCTCACGTCACACCTCTTACAGTTGGAATTCGAGCTAATGGCAACAACCTTGTCCCTGTAATACCAAGGAACACATCGGTGCCAACAACGAGGGTTATAGATTTCACAACTATTCATGATAATCAAACTGAGGCATTGATCCTAGTCTACGAAGGCGAGGGACAGAAAGCAGAAGAAAACCAGCTTTTGGGATATTTGAAAATAATGGGAATACCTGCAACACCAAAAGGAGTTCCAAAAATCTATGTGGGTATGGTCATAGACAGTAAAAACGAGCTGAGAGTTATAGCTGATGTTTACATGCCTGGATTGCAGCAACCTGTAATTCCTGCTATTGGAGCTACGATGCCAATGTCAGTGATCGATGATGGGCATTTTTGGCATGCTGAGGCACTAAATAGAACCTATGGTGACACAATGGATTTGGTTACTCTCCTCAAAAATAAATAA 1833 0.4059 MCKTRSPRHSMRMTEPDDSDVRDDEYIVTLASDSETTNEVNLLPPPEIPIGIDIGTWPCCVAVWNGSDFDLFSNKTNENIMKSGEIFKFDSSSIGVISTSEVSLSQDQVHDMSYEATIYNMRRLIGRIDTDPVVHASKNFPFRVQTLDIGVHPLISEKMTDGWRYTTVEHVLAVYLSQLRVLAETQLKRPVRNVVFTVPVSFNRFQLNRIYYACVMAGLVVLKLMPQPTAVALLYAQQQLQASSSSSSSSHEDMDSESNKIALIFNMDSGYCDVAVTLATERECQMKALAGSAIGGEDLLGNLMNHLLPDSKNKFKKHLDGDKEIKSMSILRAATLEAIHRLSSQTSVEFDLDLGDGLKICKVVKREEFEKINNEVFEKCERLIKQCLQDANVKVEDINDVIIVGECYHIPRVKNIVTKICKVTELYKGMDPLTASVCGAAVAGAIAPAIHHTSGNLDLLTSHVTPLTVGIRANGNNLVPVIPRNTSVPTTRVIDFTTIHDNQTEALILVYEGEGQKAEENQLLGYLKIMGIPATPKGVPKIYVGMVIDSKNELRVIADVYMPGLQQPVIPAIGATMPMSVIDDGHFWHAEALNRTYGDTMDLVTLLKNK* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3609 610 SUPERFAMILY Actin-like ATPase domain 259 446 IPR043129 -
Tpr4g3609 610 MobiDBLite consensus disorder prediction 1 20 - -
Tpr4g3609 610 SUPERFAMILY Actin-like ATPase domain 49 236 IPR043129 -
Tpr4g3609 610 CDD HSP70_NBD 50 435 - -
Tpr4g3609 610 PANTHER HEAT SHOCK 70 KDA PROTEIN 8 27 608 - -
Tpr4g3609 610 Pfam Hsp70 protein 50 558 IPR013126 GO:0005524|GO:0140662
Tpr4g3609 610 Gene3D Actin; Chain A, domain 4 295 379 - -
Tpr4g3609 610 PRINTS 70kDa heat shock protein signature 48 61 - -
Tpr4g3609 610 PRINTS 70kDa heat shock protein signature 194 214 - -
Tpr4g3609 610 PRINTS 70kDa heat shock protein signature 398 414 - -
Tpr4g3609 610 PRINTS 70kDa heat shock protein signature 430 450 - -
Tpr4g3609 610 PRINTS 70kDa heat shock protein signature 458 477 - -
Tpr4g3609 610 PRINTS 70kDa heat shock protein signature 539 555 - -
Tpr4g3609 610 Gene3D - 119 174 - -
Tpr4g3609 610 Gene3D - 246 427 - -
Tpr4g3609 610 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 464 567 IPR029047 -
Tpr4g3609 610 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 451 570 IPR029047 -
Tpr4g3609 610 PANTHER HEAT SHOCK PROTEIN 70KDA 27 608 IPR013126 GO:0005524|GO:0140662
Tpr4g3609 610 Gene3D - 50 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3609 Tpr-Chr4 41904450 41907241 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3609 50 569 Calmodulin-binding Proteins AT3G12580 33.586 2.56e-79 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3609 K09489 - gmx:100809773 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3609 4 41904450 41907241 Tpr4g3609 4 41904450 41907241 ECH