Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3588 ATGATGAAAGTGAAGGGAGGAACAAGACCACCATGGGTAGGACTTGGAGCTGCAGTATGGGTTCAAATAGCAGTAGGAAATTCATACACATTCCCACTTTACTCAACTTCTTTCAAATCTGTTCTTGGTTTCAATCAAAGTCAAGTTACTCTTCTTGGTGTAGCTAATGATATTGGTGAAAATGTTGGTCTTCTTCCTGGTATTGTTTGCAACAAGTTCCCTCCTTGGCTTATGCTTTTCATTGGTGCTATCTTCTCTTTCCTTGGTTTTGGTCTTCTATGGCTCTCTGTTTCTCAAACACTTCCTTCTCTTCCTTATCCTTTGCTATGGTTTGCACTTGCTATTGCTACCAACAGTTGTGCATGGTTAACCACTGCCATTCTTGTGACCAACATGAGAAATTTCCCTGTCAGTAGAGGCACAGTTGCCGGAATATTGAAAGGTTATGGAGGGATCAGTGCTGCAGTTTTCACAGAAATCTACAGGGCACTTCTTCATAATTCTTCTTCTAATTTCCTATTGTTTCTTGCTGTCGGCATTCCTGTTTTGTGCTTCACTGTCATGTTTCTCATTCGTCCTTGTACACCGGTTTCTGGTGAGAATTCTTCAGAAAAATGGCATTTTGTTTTCATTCAATGTTCAAGTGTGGCTTTAGGTGTATATTTACTTGTAACAACCACACTTGATTACATTCTTCACATAAATTCCACTGTGTCTTATGCTTTGGTGGCTTTGATGATTCTTCTTCTCATGGCTCCTCTTGCTATCCCTATAAAGATGACATTGTTTCCTCAAAAAGTCACTGAATCAGAATTATATGAGCAAAGTGAAGGCAAAGAAGAAAACACAAAACCCCTTTTACAATCTTCGTCGGCTACTGCACTTGGTAGTTTCTCCGATGCTGGTGGTTTATCTGAGGTTGATTTACTTCTTGCTGAGGGTGAAGGAGCAGTAGTACCTTCAAAAAAGAGAAGGCCTAGAAGAGGGGAAGATTTTACATTTACTGAGGCATTGGTTAAGGCTGATTTCTGGCTGTTATTTTTTGTATACTTTGTCGGTGTTGGAACTGGTGTTACTGTTATTAATAATCTGGCTCAAGTAGGTTCTGCTCAAGGTGTAGAAGATATCACCATCCTACTCTCAGTTTTCAGCTTTTTCAATTTTGTTGGTCGACTTGGTGGAGGAGTTGTTTCTGAACATTTTGTCAGGACGAAAACAATCCCGAGGACGGTTTGGATGACATGCACACAGATAGTGATGATAATCGTGTACCTTCTGTTAGCACATGCCATCAAAGGAACCCTTTATCCAGCAGTTGGATTTCTTGGCATCTGCTATGGAGTGCAATTTTCCATACTGATTCCAACAGTTTCAGAGCTTTTTGGTTTGAAGCACTTTGGATTATTTTTCAACTTCATGTCATTAGGTAATCCACTTGGTGCATTACTTTTCTCGGCTCTTCTAGCAGGGCGTATATATGACAACGAATTGGCAAGGCAACAAGGTTTTGGTCTCATTGCTGCAAGTGTTTCGTGTGTTGGTCCTGATTGTTTTAAGGTCACATTTTTGGTACTTGCTGCTGTTTGTGTTGCTGGTACCATTTCGAGCATTATCTTGACTATAAGAATTAAGCCTGTTTATCAAATGCTTTATGCTGGTGGTTCTTTTAGGTTACCTCAAATGTCATGCCAATAA 1695 0.4006 MMKVKGGTRPPWVGLGAAVWVQIAVGNSYTFPLYSTSFKSVLGFNQSQVTLLGVANDIGENVGLLPGIVCNKFPPWLMLFIGAIFSFLGFGLLWLSVSQTLPSLPYPLLWFALAIATNSCAWLTTAILVTNMRNFPVSRGTVAGILKGYGGISAAVFTEIYRALLHNSSSNFLLFLAVGIPVLCFTVMFLIRPCTPVSGENSSEKWHFVFIQCSSVALGVYLLVTTTLDYILHINSTVSYALVALMILLLMAPLAIPIKMTLFPQKVTESELYEQSEGKEENTKPLLQSSSATALGSFSDAGGLSEVDLLLAEGEGAVVPSKKRRPRRGEDFTFTEALVKADFWLLFFVYFVGVGTGVTVINNLAQVGSAQGVEDITILLSVFSFFNFVGRLGGGVVSEHFVRTKTIPRTVWMTCTQIVMIIVYLLLAHAIKGTLYPAVGFLGICYGVQFSILIPTVSELFGLKHFGLFFNFMSLGNPLGALLFSALLAGRIYDNELARQQGFGLIAASVSCVGPDCFKVTFLVLAAVCVAGTISSIILTIRIKPVYQMLYAGGSFRLPQMSCQ* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3588 564 PANTHER NODULIN-LIKE/MFS TRANSPORTER 2 563 - -
Tpr4g3588 564 SUPERFAMILY MFS general substrate transporter 14 195 IPR036259 -
Tpr4g3588 564 Gene3D MFS general substrate transporter like domains 12 205 IPR036259 -
Tpr4g3588 564 CDD MFS_Mch1p_like 10 533 - -
Tpr4g3588 564 Pfam Nodulin-like 11 258 IPR010658 -
Tpr4g3588 564 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 563 - -
Tpr4g3588 564 SUPERFAMILY MFS general substrate transporter 234 545 IPR036259 -
Tpr4g3588 564 Gene3D MFS general substrate transporter like domains 339 547 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3588 Tpr-Chr4 41718248 41722266 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3588 5 560 Nodulin-like Gene Family AT1G80530 59.537 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3588 - - mtr:MTR_4g116210 966.452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3588 4 41718248 41722266 Tpr4g3588 4 41718248 41722266 ECH