Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3583 ATGATCATGGGATATCAAAAGCCTGCATGGTTGGAAGCTCTTTATACAGAAAAGTTCTTTGTTGGTTGTTCTTACCATGAGAATGCAAAAAAGAATGAGAAGAATGTTTGTTGTTTAGATTGTTGCACAAGTATTTGTCCTCATTGTTTTCCATCTCATCGCTATCACCGCCTTCTTCAAATTCGTCGATATGTTTATCATGATGTTGTTAGATTGGAAGATCTTGAAAAACTTATTGATTGCACCAATGTTCAGGCCTATACTATCAATAGTGCCAAAGTGGTGTTCATCAAGAAGAGACCTCAAAACCGGCAATTCAAAGGATCAGGAAACTATTGCACATCATGTGATAGAACCCTTCAAGAACCTTTTATCCATTGTTCTCTTGGATGCAAGGTGGATTTTGTGCTGAAACACTACAAGGACCTTTCACCTTACTTAAGGATATGCAACATCCTACAATTAAGCCCTGATTATCTGATTCCACAAGAAATGGGGGATGAATTAGAGATAACAAGATCAACAATTGTGGATTGTGATGAAGCAATGAGTTCATATTCAGGATCATCATCAGGATCAGAGAATATGAGCATGATGGCATGCACAGAAATTGTTAGGAAAAGAAGAAGTGGATGGACAAGTATGTGTGCAAAATTCATGGCCGATAATAATAATAATAGCAATAAAGTTTCTGATGAAGACATGGCTACAATTTTGATTAGTAGAAGAAAAGGAATCCCTCATAGATCTCCTCTATGTTAG 762 0.3675 MIMGYQKPAWLEALYTEKFFVGCSYHENAKKNEKNVCCLDCCTSICPHCFPSHRYHRLLQIRRYVYHDVVRLEDLEKLIDCTNVQAYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRTLQEPFIHCSLGCKVDFVLKHYKDLSPYLRICNILQLSPDYLIPQEMGDELEITRSTIVDCDEAMSSYSGSSSGSENMSMMACTEIVRKRRSGWTSMCAKFMADNNNNSNKVSDEDMATILISRRKGIPHRSPLC* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3583 253 Pfam PLATZ transcription factor 62 133 IPR006734 -
Tpr4g3583 253 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 253 - -
Tpr4g3583 253 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 3 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3583 Tpr-Chr4 41665110 41667392 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Tpr4g3583 PLATZ 8.6e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3583 - - gmx:100785737 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3583 4 41665110 41667392 Tpr4g3583 4 41665110 41667392 ECH