Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3466 ATGGACTGCAACAAAGAAGAGGCCTTAAGGGCCAAGGCCATTGCTGAAAAGAAGATGGAAAGCAGGGATTTCGTGGCGGCTCGAAAGTTTGCTCTTAAGGCTCAGAAGCTGTATCCTGTTTTGGAAAACATAGCTCAAATGCTTGTTATTTGTGATGTGCACTGCTCTGCTGAGCAGAAAGTGATTGATGATGAGACTGATTGGTATGGAATTCTTCAGCTAGAACACACAGCTGGTGATACAATGATTAAGAAGCAGTACCGAAAGTTTGCTCTTCAACTTCATCCTGATAAAAACAAGTTTGCTGGTGCAGAAGCTGCATTTAAGCTGATTGGGGAAGCTCAAAGAGTGCTTTTAGACAGAGAAAAACGAACTAGATATGACATGAAGCTTAAAGCGAAAAAAACTGCTATGCCACATCATAATCCACAGAAGGTTCCTACGAATTTCAATTCTGCAATGAAAAACAATGCCAGGCCCAATTTTACAAACTCGAACACCCAGCAGCAGCAGCAGCAGCAGCAGCAAAATAAGCAGCCCGCGCAGCAGCAAAATGGTGGGCGCAGTACTTTTTGGACTGCTTGTCCGTTTTGTTCTGTGAAGTATCAATACTACAGAGAAGTATTAAATAAACCTCTTCGCTGTCAACACTGCCATAAGCCATTTGTTGCATATATTGTGGATATACAAGGTACATCACGGACAACTAACTCAAGTCAGCAAGCTTCCAAGGAGAATGTTGGATCTCAAGGCAACTCGCATGCTGAGAAATCCAATACAAACCCTTTCAAGAATAAAGTCCCGGTTGGTGTCTCTAGAAAGTCAAATGTGAAGAGAAACTGGAATCAAGTGAATGAATCCAGTCAAAGCTCTGATTCTACAAGCAGCAGTGATTCTAGTGATTCTGAAGTTGAAAGAATGGGTGGGTATGGTTTTCCTGGTGTAAGAAATCATTCAACTGAGCAGCAACCAAGATCTGTGCGACAGAAGCACAAGGTTTCCTACGGTGATAATATGAGCAACAATGACAATGACTTATCAAAAAAGGGTCATGAGAATAGATCAGCTTGTGGTGATGGTCAAAGTCATGGCGAGAAAACTAAAACTAAAGATCAGAATGGTTTAACAGCCGATCCAAGAGATGAACATGAAAAGGTAAAACAGAAACAGGATTTTCATTTTAAAGAGAGCTCACTGGATAGAAATGAGGAAAAAAAGAGGGCTAGTGGAAAAGAAGCTGTGGGAGGGTCGAAGCATATGGACGAAACTTCAGAGAATTCTTCTCCAAATTCAATGTGCAATACAACAACTCTTCCTAATGCTTATGCCTATTTCAATGCAGAGTTCAGTGATTTTGACAAGAACAAAAAAAAAGAATGTTTTGCACCTGGGCAGATTTGGGCTATCTATGATGCAAAAGATGGCATGCCTAGATTATACGCTTTGATCAGAAAAGTTTTCTCTCCTGGATTTAAGTTGCAGGCAACATGGCTTGAATCACATCCAGATGACAAAGATGAAATCAAGTGGGTAGGTGAGGATTTGCCGGTTGCTTGTGGGAAATTTAAACTTGGTGCCACTGATATCTTTGAAGATCATCAGCTGTTTTCTCATCTGGTTCAATGCGAAAGGATTGGCCGCAATACTTTTCATGTGTATCCTAGAAAGGGAGAAACGTGGGCTCTTCTTAAAAATTGGGATATTAAATGGTACATGGATGCGGAATCTCATAAGCAGTATGAATATGAGTTTGTTGAAATCCTATCAGATTATGCCAATGGTGAGGGTGTACATGTTGCGTACTTGGGTAAATTGAAAGGTTTTGTAAGCCTCTTCTTTCGAATTATGAGAGAAGATAATCAGATGTTTCAAATTCCATCCCTGGAGTTATTTAGATTCTCTCACATGGTTCCATCTTTCAAAATGACTGGTCAGGAAGGAGTTGGTGTTCATTTAGGATATTTAGAACTTGATCCTGCATCTTTACCAATGGATCTTGAAGAGATTGCTGATCCTCAAAATTTGGATGTCAAGATTGGGCATGGTTCATGTGGCAGTGATAATGCAGGATCTTCAAAAATATCAAAACCCTTGATGACCCCTGACAAAGTTATATCCACTCCCAAGTTTAATGTTGAAACAAGCAACATGACTGAGATAAAGGATTCTTTTGATGATATCGATGACTGCCATGCTTGTCCAGCTTCAACCCCAGAAGCTTTTGAAATTCCAGATGCTCAGTTCTTCAATTTTGAAACTGGGAGGTCCCTTGATAAGTTCCAGATTGGTCAAATATGGGCATTTTACAGTGACGAGGATGAAATGCCAAAATACTATGGTCAGATTAAAGAAATTGAGACTAGCCCTGATCTTAAATTGCATGTTTATTGGCTCGCTTGCTGTTGGCTACCAGAGAATACTATTAAATGGGAAGATGAAGATATGCTTATTTCATGTGGCAGATTTAATGTCATTAAAACAAATGATTTTCTCTCTACTTACAGTAACCTGTCTTGTATTTCACATCAAGTACAAGCTGATGCTATTGGTAGGAATTATGCCATCTATCCGAAAAAAGGCGAAGTATGGGCTCTTTATAGGAATTGGTCAAACAAAATCAAGTGTTCTGACCTGAAAAATTGGGAGTATGACATAGTGGAAGTTCTTGGAGAAGCTGATTTGTTTATAGAGACTTTAGTTTTAGAGAAGGTTAGTGGTTTTAGTTCTGTCTTCAGAGGCAAATCAAATGAAGGTTCTTCCGTCAACCTGAGAATATCCAGAAAAGAATTGCTGAGGTTCTCTCACCAAATTCCAGCTTTCAAACTGACAGAACAGCATGACGGCAATCTGAGAGGATTCTGGGAGCTTGATCCAGGAGCAGTACCACCTTCATTCCTATGGCCTTAG 2907 0.4001 MDCNKEEALRAKAIAEKKMESRDFVAARKFALKAQKLYPVLENIAQMLVICDVHCSAEQKVIDDETDWYGILQLEHTAGDTMIKKQYRKFALQLHPDKNKFAGAEAAFKLIGEAQRVLLDREKRTRYDMKLKAKKTAMPHHNPQKVPTNFNSAMKNNARPNFTNSNTQQQQQQQQQNKQPAQQQNGGRSTFWTACPFCSVKYQYYREVLNKPLRCQHCHKPFVAYIVDIQGTSRTTNSSQQASKENVGSQGNSHAEKSNTNPFKNKVPVGVSRKSNVKRNWNQVNESSQSSDSTSSSDSSDSEVERMGGYGFPGVRNHSTEQQPRSVRQKHKVSYGDNMSNNDNDLSKKGHENRSACGDGQSHGEKTKTKDQNGLTADPRDEHEKVKQKQDFHFKESSLDRNEEKKRASGKEAVGGSKHMDETSENSSPNSMCNTTTLPNAYAYFNAEFSDFDKNKKKECFAPGQIWAIYDAKDGMPRLYALIRKVFSPGFKLQATWLESHPDDKDEIKWVGEDLPVACGKFKLGATDIFEDHQLFSHLVQCERIGRNTFHVYPRKGETWALLKNWDIKWYMDAESHKQYEYEFVEILSDYANGEGVHVAYLGKLKGFVSLFFRIMREDNQMFQIPSLELFRFSHMVPSFKMTGQEGVGVHLGYLELDPASLPMDLEEIADPQNLDVKIGHGSCGSDNAGSSKISKPLMTPDKVISTPKFNVETSNMTEIKDSFDDIDDCHACPASTPEAFEIPDAQFFNFETGRSLDKFQIGQIWAFYSDEDEMPKYYGQIKEIETSPDLKLHVYWLACCWLPENTIKWEDEDMLISCGRFNVIKTNDFLSTYSNLSCISHQVQADAIGRNYAIYPKKGEVWALYRNWSNKIKCSDLKNWEYDIVEVLGEADLFIETLVLEKVSGFSSVFRGKSNEGSSVNLRISRKELLRFSHQIPAFKLTEQHDGNLRGFWELDPGAVPPSFLWP* 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3466 968 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Tpr4g3466 968 MobiDBLite consensus disorder prediction 163 186 - -
Tpr4g3466 968 SMART dnaj_3 66 123 IPR001623 -
Tpr4g3466 968 CDD DnaJ 67 120 IPR001623 -
Tpr4g3466 968 MobiDBLite consensus disorder prediction 235 431 - -
Tpr4g3466 968 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 966 - -
Tpr4g3466 968 SUPERFAMILY Chaperone J-domain 62 131 IPR036869 -
Tpr4g3466 968 MobiDBLite consensus disorder prediction 235 266 - -
Tpr4g3466 968 PANTHER - 1 966 - -
Tpr4g3466 968 MobiDBLite consensus disorder prediction 275 303 - -
Tpr4g3466 968 Pfam DnaJ domain 67 128 IPR001623 -
Tpr4g3466 968 MobiDBLite consensus disorder prediction 344 419 - -
Tpr4g3466 968 Pfam Domain of unknown function (DUF3444) 443 646 IPR024593 -
Tpr4g3466 968 Pfam Domain of unknown function (DUF3444) 739 945 IPR024593 -
Tpr4g3466 968 Gene3D DnaJ domain 53 157 IPR036869 -
Tpr4g3466 968 PRINTS DnaJ domain signature 69 87 IPR001623 -
Tpr4g3466 968 PRINTS DnaJ domain signature 87 102 IPR001623 -
Tpr4g3466 968 PRINTS DnaJ domain signature 103 123 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3466 Tpr-Chr4 40676270 40681171 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3466 4 224 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.956 2.84e-31 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3466 - - mtr:MTR_4g118660 1500.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3466 4 40676270 40681171 Tpr4g3466 4 40676270 40681171 ECH