Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr4g3448 | ATGGGTTGTTTTCCTTGTTTTGTAGCTTTCAACAAAGAAGCTTCCCATGTTCACTCTAGAAGGGTTACCTCAGAAAAATTCAAATTACTGAGTACCTCAAGTCCGAACACGAAAGATGAGTTAGAAGGAAGTGTGCGTACACATACATTTACATTACAAGAGCTTAAAGCCGCTACTAATAATTTTTCGCCAGAATGTTTACTAGGTGAAGGGGGCTTTGGGCCTGTATACAAAGGTCGCCTTGAGAACCCTAAGAACAAAGCAGTTGCTGTAAAACAGCTTAAGCAGAAAAGTTGTCAAGGTGATCGAGAATTTTTGGCGGAGGTTCTCATGCTGAACCTATTAAATCACAAAAATCTTGTGAACTTGATTGGTTATTGTGCCGATGGAGATCAACGGTTACTTGTTTACGAGTATATGGCATTTGGATCTTTAGACAAGCATTTACATGATCTTCCTCCTCGCGCAAAGCCGCTAGATTGGAATACAAGGATGAAAATAGCATTGGCGACAGCAAAGGGATTGAAGTATATGCATAAGGCAAATCCCCCTGTAATATATAGAGACTTAAAATCATCCAACATTCTCCTTGATGAAAATTATCAAGCCAAGTTATCAGATTTTGGGTTGGCAAAACTTGGACCAATTGGTGATAGGAGTCATGTAACCACTAGAGTAATGGGAACATATGGTTATTGTGCCCCTGAATATTTTATGACAGGACAACTAACTATGAAGTCTGATGTTTATAGTTATGGAGTATTCATGCTCGAACTTATCTCAGGACGCAGAGCTATCGATGATAAACGTCCACAAGCCGAGCGAAGTCTAGTTGTTTGGGCAAAAAGTCATTTTAAAAACCGTAGGGACTTTATCAAATTGGTTGACCCTCAACTTCAAGGTCGTTTTCCAATGGAAGGACTATATCAAGCAGTTGCTATTGCAGCAATGTGTGTACATACACAAGCTTCAACAAGGCCTCTCATTGGTGATATTGTGGATAGTCTTACATACATGACAAGAAGGGACACATCACCCAAATTGAGAAAAAAGTATGATGACTAA | 1065 | 0.3944 | MGCFPCFVAFNKEASHVHSRRVTSEKFKLLSTSSPNTKDELEGSVRTHTFTLQELKAATNNFSPECLLGEGGFGPVYKGRLENPKNKAVAVKQLKQKSCQGDREFLAEVLMLNLLNHKNLVNLIGYCADGDQRLLVYEYMAFGSLDKHLHDLPPRAKPLDWNTRMKIALATAKGLKYMHKANPPVIYRDLKSSNILLDENYQAKLSDFGLAKLGPIGDRSHVTTRVMGTYGYCAPEYFMTGQLTMKSDVYSYGVFMLELISGRRAIDDKRPQAERSLVVWAKSHFKNRRDFIKLVDPQLQGRFPMEGLYQAVAIAAMCVHTQASTRPLIGDIVDSLTYMTRRDTSPKLRKKYDD* | 355 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr4g3448 | 354 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 185 | 197 | IPR008271 | GO:0004672|GO:0006468 | |
Tpr4g3448 | 354 | Gene3D | Transferase(Phosphotransferase) domain 1 | 140 | 353 | - | - | |
Tpr4g3448 | 354 | Pfam | Protein tyrosine and serine/threonine kinase | 67 | 335 | IPR001245 | GO:0004672|GO:0006468 | |
Tpr4g3448 | 354 | Gene3D | Phosphorylase Kinase; domain 1 | 32 | 139 | - | - | |
Tpr4g3448 | 354 | PANTHER | OS07G0668900 PROTEIN | 31 | 348 | - | - | |
Tpr4g3448 | 354 | CDD | STKc_IRAK | 68 | 337 | - | - | |
Tpr4g3448 | 354 | SUPERFAMILY | Protein kinase-like (PK-like) | 46 | 334 | IPR011009 | - | |
Tpr4g3448 | 354 | PANTHER | OS07G0668900 PROTEIN | 31 | 348 | - | - | |
Tpr4g3448 | 354 | SMART | serkin_6 | 62 | 339 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr4g3448 | 354 | ProSiteProfiles | Protein kinase domain profile. | 62 | 339 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr4g3448 | Tpr-Chr4 | 40501952 | 40504137 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr4g3448 | 1 | 354 | Glycoside Hydrolase | AT3G07070 | 54.301 | 1.42e-139 | 400 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-1 | Tpr4g3448 | PK_Tyr_Ser-Thr | 7.8e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr4g3448 | - | - | mnt:21406335 | 454.136 |