Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3431 ATGAAAAAGTTAAAGCCAGGATTAAAAAAGGGTGCTTTTACTGAAGAGGAAAAGAAGACTGTCATAGAACTCCATGATCAATTAGGAGACAATTTGGCTGCAATTTCTCAGAAGGTACCTGGACGAACAAACCGTGATGTCAGGCACTTTTGGAAAAGGAAGATGGGGCATTTGGATAACAGCAGTATCAAATTTGATAACAAAATTGATAACAGCAGTATCAAACTTGACAGCAGCACTGTGAAATTTCCTGTATACGAGTTCACATATGAAGATCCGCCACAGCTACCGCCTGGCAGCTACGTCTGCTTTTTTGATGAAGTAGCCAAATTTCCTTTGAAGTAG 345 0.4 MKKLKPGLKKGAFTEEEKKTVIELHDQLGDNLAAISQKVPGRTNRDVRHFWKRKMGHLDNSSIKFDNKIDNSSIKLDSSTVKFPVYEFTYEDPPQLPPGSYVCFFDEVAKFPLK* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3431 114 SMART sant 9 57 IPR001005 -
Tpr4g3431 114 PANTHER MYB TRANSCRIPTION FACTOR MIXTA-LIKE PROTEIN 2 83 - -
Tpr4g3431 114 Pfam Myb-like DNA-binding domain 10 52 IPR001005 -
Tpr4g3431 114 SUPERFAMILY Homeodomain-like 2 58 IPR009057 -
Tpr4g3431 114 CDD SANT 12 53 IPR001005 -
Tpr4g3431 114 ProSiteProfiles Myb-like domain profile. 5 55 IPR001005 -
Tpr4g3431 114 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 5 59 IPR017930 -
Tpr4g3431 114 Gene3D - 7 59 - -
Tpr4g3431 114 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3431 Tpr-Chr4 40362265 40362915 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3431 1 58 MYB Transcription Factor Family AT2G26960 46.552 6.25e-14 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Tpr4g3431 Myb_DNA-binding 6.9e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3431 K09422 - sspl:121744561 67.781