Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3408 ATGGAACAGAGAACAAACTCTTCAACATCATCATCATGGTTTCTTCTATTCTCAATTCTTTCTTGTCTTTTTCTCTTTAATTTCTTAGGATCTGTTGGAGCTTACAAAAATTACACAGTTGGAGATTCTTTAGGTTGGTTTGACAATCTTGAAAAACCTACTGTTAATTATCAGAAGTGGGCTGCCAAGAAAGAATTCAGCTTGGGAGATTTTCTAATTTTCAACACAGACAATAACCACTCTCTTGTACAAACATACAACTTCACCACATACAAACTATGTGATTATGATGATGCACAAGACAAAGACACAGTCCAATGGTCATCTGCTGATCCATCGAACACGGGGATACAACCGGTGACAGTGGCGGTTCCTTTACTGAAGGAAGGAGCGACGTATTTCTTCTCGAGTGATTATGATGGCGAACAGTGCAAAAATGGACAACATTTCAATATAAATGTGACTCATGGACAAGGGTTGCCGAAGAGTCTTCGATCCTCCGATGATGCTCCATCCCCTATTAGTCCAATTTCCGGTGATGACGAGTCAGCACCAGACACAAATGTTCCTTCCAATTTCAATAATCCTAAGGAAGACAAAGACGATGAAAAAAGTACTGACAAAGATAACGAGAAATCTAATTCTAATTCGGTGTTAATGTATGCACAACTTCACAACAAGTTGTATGGTTCTCTTGTCTTGTTAGGGACATTTTTCATATTTTATTAA 729 0.3813 MEQRTNSSTSSSWFLLFSILSCLFLFNFLGSVGAYKNYTVGDSLGWFDNLEKPTVNYQKWAAKKEFSLGDFLIFNTDNNHSLVQTYNFTTYKLCDYDDAQDKDTVQWSSADPSNTGIQPVTVAVPLLKEGATYFFSSDYDGEQCKNGQHFNINVTHGQGLPKSLRSSDDAPSPISPISGDDESAPDTNVPSNFNNPKEDKDDEKSTDKDNEKSNSNSVLMYAQLHNKLYGSLVLLGTFFIFY* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3408 242 Pfam Plastocyanin-like domain 46 148 IPR003245 GO:0009055
Tpr4g3408 242 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Tpr4g3408 242 MobiDBLite consensus disorder prediction 160 214 - -
Tpr4g3408 242 MobiDBLite consensus disorder prediction 195 211 - -
Tpr4g3408 242 Gene3D - 35 159 IPR008972 -
Tpr4g3408 242 PANTHER BNAA08G26900D PROTEIN 9 183 - -
Tpr4g3408 242 ProSiteProfiles Phytocyanin domain profile. 36 156 IPR003245 GO:0009055
Tpr4g3408 242 PANTHER BLUE COPPER PROTEIN 9 183 IPR039391 GO:0009055
Tpr4g3408 242 SUPERFAMILY Cupredoxins 36 154 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3408 Tpr-Chr4 40180092 40182343 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3408 19 204 Phytocyanin Superfamily AT1G08500 62.827 3.58e-79 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3408 - - gmx:100526961 313.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3408 4 40180092 40182343 Tpr4g3408 4 40180092 40182343 ECH