Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3394 ATGTTAAGAGTTTCTCAATTTCGAATTGGATTTTCGATTCCAAAACTCTCTCCACTTTCATCAATTCCTTCACTCTTCTCTTTCTCTTTTCCTTCTCATTCTCACTCTCAAATCCACACTTTTTCTTCCACAAAAACCTTCCATTTTCATTCACCTTCTTCTCTTCCTCTTTCACCCTTTATTTCAATTATGCCTCTGAAAGCATCAGCTTCATATAGTAGTGGTGTTGAAGGTGGAGGTGAAAGGGAAATATTGGTGCAGCATTTGTTGGTGAAAGAAGATGACCAGAAACTATTGTTGGATATTCAAAAGAGAATTGTTGCAGGTGAAGATTTGAGTGATCTTGCTGTGGACCATTCAATTTGCCCTTCTAAAGATGAAGGAGGAATGCTTGGGTGGGTGAGAAAGGGACAAATGGTTCCTGAATTTGAGGAGGCTGCATTTAGTGCACCTTTAAACAAAGTTGTAAGGTGCAAGACAAAATTTGGATGGCACCTGCTGCAGGTTTTATCTGAAAGGGAAGAATCAGTACTTCAAGAAATTAAACCGGATGAGCTTCATGTGAAATTTCAAGATCCCAACTTTTCGGAGGAGGCGCAGTTAATTGATGTTCGAGAGCCTGAAGAAGTGGCCACAGCATCTTTGCCAGGATTTACAGTTCTTCCCCTCCGGCAATTTGGAAGCTGGGGGCCTGAAGTAAACACCAAATTTGACCCTCAAAAGGATACATATGTTCTGTGTCATCACGGCATGCGGTCGTTACAAGTTGCCCGGTGGTTGCAGGCACAGGGGTTCCGGAAAGTATACAATATTTCTGGAGGAATCCATGCCTATGCAGTTCAGGTCGATCCGTCAGTTCCTACATACTGA 870 0.423 MLRVSQFRIGFSIPKLSPLSSIPSLFSFSFPSHSHSQIHTFSSTKTFHFHSPSSLPLSPFISIMPLKASASYSSGVEGGGEREILVQHLLVKEDDQKLLLDIQKRIVAGEDLSDLAVDHSICPSKDEGGMLGWVRKGQMVPEFEEAAFSAPLNKVVRCKTKFGWHLLQVLSEREESVLQEIKPDELHVKFQDPNFSEEAQLIDVREPEEVATASLPGFTVLPLRQFGSWGPEVNTKFDPQKDTYVLCHHGMRSLQVARWLQAQGFRKVYNISGGIHAYAVQVDPSVPTY* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3394 289 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 81 171 IPR000297 GO:0003755
Tpr4g3394 289 Pfam Rhodanese-like domain 194 279 IPR001763 -
Tpr4g3394 289 SMART rhod_4 181 284 IPR001763 -
Tpr4g3394 289 SUPERFAMILY FKBP-like 82 170 - -
Tpr4g3394 289 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 289 - -
Tpr4g3394 289 Gene3D - 175 286 IPR036873 -
Tpr4g3394 289 ProSiteProfiles Rhodanese domain profile. 195 287 IPR001763 -
Tpr4g3394 289 Gene3D - 79 174 IPR046357 GO:0003755
Tpr4g3394 289 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 176 287 IPR036873 -
Tpr4g3394 289 Pfam PPIC-type PPIASE domain 92 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3394 Tpr-Chr4 39997451 40001582 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3394 82 289 Sulfurtransferasese or Rhodanese AT5G19370 65.385 4.32e-102 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3394 - - mtr:MTR_5g089330 458.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3394 4 39997451 40001582 Tpr4g3394 4 39997451 40001582 ECH