Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3392 ATGTTGAGAGTTTATCAATTAAGAAGAGTTGGACTGTTGATTCCAAAACTCTCTTCGCTTTCCACAATTCCTTCATTCTCTTTTTATTCTCATTCTCATTCTCACTCACAAATCCACACTTTTTCATCCACAGAAACGATCCATTTTCAATCACATTATTCTCTCACTCTTTCACCATTTACTTCTCCCAAACAACAAGCTTCATATAGTAGTGGCGTTGAAGGTGGTAGGGAAAGAGAAATATTGGTGCAACATTTGTTGGTGAAAGAAGATGATCAGAAACTATTGTTGGATCTTCAAAAGAGAATCTCTGCAGGTGAAGATTTGAAGGATCTTGCTGTGGACCATTCAATTTGCCCTTCTAAAGATGAAGGAGGAGTGCTTGGGTGGGTGAGAAAGGGACAAATGGTTCCTGAACTTGAGGAGGCTGTGTTTAATGCACCTTTAAACAAAGTTGTAATGTGCAAGACAGAATTTGGATGGCACCTGCTGCAGGTTTTATCTGAAAGGGAAGAGTCTGTATTTGAAGACATTCAACCTGATGAGCTGCATGTGAAACTTCAAGATCCCAACTTCTCCGGGAAGGCGCAGTTAATTGATATTCGAGAGCCTCAAGAAGTTGACAAAGCATCTTTGCCAGGATTTAAGGTTCTTTCCCTCCTACAATTTGGAAAATGGGGGACTGAGATAAACTCTAAATTTGATCTTCAAAAGGATACCTATGTTCTGTGTCATCACGGCATACGGTCGTTACAGGTTGCCAGGTGGTTGCAGTCAAAGGGGTTCAGGAAAGTATACAATATTTCTGGAGGAATCCATGCCTATGCGGAGCAGGTCAATCCGTCGGTTCCTACATACGCGAGAGAAAATTTTGGTGAGAGGACTCCATTCAATATTTTAGCAGGTCACCCTTTCAAAACTGCCAACTTTTACTTGAGAGGCAAGGCATCTGATGGTCGCAAATAA 966 0.412 MLRVYQLRRVGLLIPKLSSLSTIPSFSFYSHSHSHSQIHTFSSTETIHFQSHYSLTLSPFTSPKQQASYSSGVEGGREREILVQHLLVKEDDQKLLLDLQKRISAGEDLKDLAVDHSICPSKDEGGVLGWVRKGQMVPELEEAVFNAPLNKVVMCKTEFGWHLLQVLSEREESVFEDIQPDELHVKLQDPNFSGKAQLIDIREPQEVDKASLPGFKVLSLLQFGKWGTEINSKFDLQKDTYVLCHHGIRSLQVARWLQSKGFRKVYNISGGIHAYAEQVNPSVPTYARENFGERTPFNILAGHPFKTANFYLRGKASDGRK* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3392 321 ProSiteProfiles Rhodanese domain profile. 192 284 IPR001763 -
Tpr4g3392 321 SMART rhod_4 178 281 IPR001763 -
Tpr4g3392 321 Gene3D - 172 299 IPR036873 -
Tpr4g3392 321 Gene3D - 76 171 IPR046357 GO:0003755
Tpr4g3392 321 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 286 - -
Tpr4g3392 321 Pfam PPIC-type PPIASE domain 88 168 - -
Tpr4g3392 321 SUPERFAMILY FKBP-like 79 167 - -
Tpr4g3392 321 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 173 286 IPR036873 -
Tpr4g3392 321 Pfam Rhodanese-like domain 193 277 IPR001763 -
Tpr4g3392 321 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 78 168 IPR000297 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3392 Tpr-Chr4 39985674 39989017 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3392 79 286 Sulfurtransferasese or Rhodanese AT5G19370 62.981 3.56e-93 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3392 - - mtr:MTR_5g089330 464.536