Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr4g3376 | ATGGAAGAATCAGGTGAGTTGCAACCAGAAGAAAATAAAGCCTCTGGGGAGAAAAATCCGAAAAGAAAGCTCAAAACACCTGCACAGCTTAAGGGCTTGGAGAAATTTTATACTGAGCACAAATATCCGACAGAGGAATTGAAATTAGCGATTGCTGAGGAGTTAGATTTGACAGAAAAGCAAGTATCTGGATGGTTTTGCCACCGAAGATTAAAAGATAAAAGATTGTTGAAAGAAGAAGCAAATGCTGCTGCTAATGGACGACAAGATCGTTCAAGTGGTGTCATCCAGGATCGTGGCAGTGGACTCGGGCAAGATTCATGTGGAAGCAGTAAGCATGGTGATTATAAGTATCTGGATCCTAAAGAGGTTGAGAGCCATGACCTCTACAATCGTGATTTGTCGGTTGCAGATATGACCTATGGACGTAGGAACCATTTTTCTGAAAATGTTAGTGGAATGGACGATACATCATCTGAGAGTAGCTCTTTTTTGCAAGATCGGTTGTATCCTCAAGGCCAAGATCCATATGAGACCGAGCCATCTAGATATCTAGCACATAGTAAAGCTCTTCCGCCCTTAAATCCCAAGGGTACAGTTAACATGGGATATAAACCATCGGGATATTTGAAAGTGAAGGGTGAGATAGAGCATGCTGCTATAACCGCTGTTAAGAAGCAATTAGGAAGGAACTATCGGGAAGATGGTCCACTACTTGGTGTAGAATTTGACCCCCTTCCTCCAGGGGCATTCGAATGCCAAACTGAAGATCCAGTTCATGAACCATACAGTATTGCTGATCCTGCCCTTCTGAATTCTCCAGAAATCTCCACAGTAAAAAGGCGGCCTGGTCTTAGCTCTAGATATGATTCGTATTATACTAAACATAGTTCCCAAGATAATCATATGGAAGGAGACGACTTTGGTTCCTTGCATGATTCTGACGTTCATGATAAACAAGATAAGAAAGCTTTCCATGGTACAAAACACAGACAAGCTTTTCAGAGTAATGCGGCTCGTTTTCCTGGAAGGAACTCTTCATTGGATTTGTATGAAGACTCTACCGGGGAAGCTGCTTATAATATCGCTAAGAATCATAGGAAGGACATCAAGCGCGGTGTTGAGGGGATGAGATCTGATTCTGCTTCTAACCATAGTGATCACTATGAAGAAAACCTTGCAGTTAAACATGCAGACTTTGACTATGATAACATCAAGCCAAAGAATGTGCAAAGGAGTGTTCCTGCAGACTTTCTGCAACATGACTATGATAAAATCAATCCAAAGAATGCGCAAAGGAGTGAACATGTAAAGTCCAAGCCTTCAAATTCAATCCGTAATTCTCGAGGTTCTGTGGATACTGAAGAAAGAGGACTATCTTCTAGAATGGCTAAGGAAGAGATGTTTAAGGGGGACAAGAAGGCAAAGAAGCAATATCGTGACGCAAGCGGAGCAGGGATGCTTTCAAATGAAACTATGGTTACAAAACGACTTAAACCCAATTCATTTCAGCCATACATTATGAAACAATTGCCTGTTGCTGAGATAGAACCAAGGAAAAATCAGAGATCTGCTGCAGAGATGCCGTCTAGCTTTAGCGAGGATGAAACTGCGGATACCAGTTCTTCATTGGATTGA | 1638 | 0.4182 | MEESGELQPEENKASGEKNPKRKLKTPAQLKGLEKFYTEHKYPTEELKLAIAEELDLTEKQVSGWFCHRRLKDKRLLKEEANAAANGRQDRSSGVIQDRGSGLGQDSCGSSKHGDYKYLDPKEVESHDLYNRDLSVADMTYGRRNHFSENVSGMDDTSSESSSFLQDRLYPQGQDPYETEPSRYLAHSKALPPLNPKGTVNMGYKPSGYLKVKGEIEHAAITAVKKQLGRNYREDGPLLGVEFDPLPPGAFECQTEDPVHEPYSIADPALLNSPEISTVKRRPGLSSRYDSYYTKHSSQDNHMEGDDFGSLHDSDVHDKQDKKAFHGTKHRQAFQSNAARFPGRNSSLDLYEDSTGEAAYNIAKNHRKDIKRGVEGMRSDSASNHSDHYEENLAVKHADFDYDNIKPKNVQRSVPADFLQHDYDKINPKNAQRSEHVKSKPSNSIRNSRGSVDTEERGLSSRMAKEEMFKGDKKAKKQYRDASGAGMLSNETMVTKRLKPNSFQPYIMKQLPVAEIEPRKNQRSAAEMPSSFSEDETADTSSSLD* | 546 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr4g3376 | 545 | MobiDBLite | consensus disorder prediction | 82 | 114 | - | - | |
Tpr4g3376 | 545 | Pfam | Homeodomain | 21 | 75 | IPR001356 | GO:0003677 | |
Tpr4g3376 | 545 | ProSiteProfiles | 'Homeobox' domain profile. | 16 | 76 | IPR001356 | GO:0003677 | |
Tpr4g3376 | 545 | PANTHER | HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN | 1 | 545 | - | - | |
Tpr4g3376 | 545 | MobiDBLite | consensus disorder prediction | 514 | 545 | - | - | |
Tpr4g3376 | 545 | MobiDBLite | consensus disorder prediction | 86 | 108 | - | - | |
Tpr4g3376 | 545 | Gene3D | - | 12 | 85 | - | - | |
Tpr4g3376 | 545 | MobiDBLite | consensus disorder prediction | 7 | 28 | - | - | |
Tpr4g3376 | 545 | CDD | homeodomain | 21 | 75 | IPR001356 | GO:0003677 | |
Tpr4g3376 | 545 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
Tpr4g3376 | 545 | MobiDBLite | consensus disorder prediction | 524 | 545 | - | - | |
Tpr4g3376 | 545 | PANTHER | HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN | 1 | 545 | - | - | |
Tpr4g3376 | 545 | SUPERFAMILY | Homeodomain-like | 15 | 78 | IPR009057 | - | |
Tpr4g3376 | 545 | SMART | HOX_1 | 18 | 80 | IPR001356 | GO:0003677 | |
Tpr4g3376 | 545 | MobiDBLite | consensus disorder prediction | 425 | 442 | - | - | |
Tpr4g3376 | 545 | MobiDBLite | consensus disorder prediction | 450 | 480 | - | - | |
Tpr4g3376 | 545 | MobiDBLite | consensus disorder prediction | 425 | 484 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr4g3376 | Tpr-Chr4 | 39736335 | 39742121 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr4g3376 | 3 | 545 | Homeobox Transcription Factor Family | AT4G03250 | 40.214 | 3.32e-87 | 276 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | HB-other | Tpr4g3376 | Homeodomain | 4.5e-15 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr4g3376 | - | - | gmx:100803515 | 775.007 |