Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3368 ATGGATTCTCCTACTTTCACTTTTGTTCTCTACACCCTCTTTCTTTTGTGTCTCAACACTACTCTTTCTACTTCTTCATCATCATCATCATCATCATCATCATCATCACTTCCTATGTCTTTGAAAACACAAGCTACTATCTTAGTTTCTCTCAAACAAGATTTTGAACCAAACACTTCCTTAAAAACATGGAACATCTCTAACTACATGTCCCTTTGTTCTTGGTATGGTATTCAATGTGACACAAACAATACTTCTATTGTGTCACTAGACATATCAAACTTGAACATTTCAGGTACTTTTTCATCTTCCATCACAAAACTGTCCAACTTGAAATTCCTCAACATATCAAACAACTTGTTCAATGGAAATCTAAGTTGGAAATTCTCTTATTTCAAAGATCTCGAAGTTTTCGATGCTTACAACAATGAGTTCAATTGTTCACTACCTATTGAAGTCACTAAGTTACCTAAACTCAAGTACTTGAATCTTGGAGGAAATTTTTTCAATGGTGAAATTCCTTCAAGCTATGGAAACATGTTGAGTCTTAACTATTTGTCTCTTGCAGGTAATGATTTGAGAGGTTTCATACCTTATGAGCTTGGAAATCTTACTAACTTGACACATCTTTTGTTAGGTTATTACAATGTGTTTGATGGTGAAATTCCATCTCATTTTGGTAATCTTGTTAATTTAGTTCATCTTGATCTTGCAAATTGTGGTTTGAAAGGTTCAATTCCAAATGAGTTAGGAAAACTTTATAAACTAGACACACTTTTCTTGCAAACCAATCAACTTAGTGGTTCGATTCCTTCGCAATTAGGGAATCTTAGTAGTTTGAAATCTCTTGATATGTCAAACAATGAGTTAAGTGGAAATATTCCTAATGAGTTTTCAAATCTTCATGAACTCACACTCTTGAACTTGTTCATCAATAAATTATATGGTGAAATTCCATCTTTTGTTTCTGAGTTACCAAATTTAGAAGTGTTGAAGCTTTGGCATAATAATTTTACAGGTTCTATTCCTTCAAAGTTAGGACAGAATGGTAAATTGAGTGAGCTTGATTTATCAACAAATAAACTCACTGGATTAGTACCTAAATCTTTATGCATTGGAAAAAAGCTTAAGATTCTTATCTTGCTTAACAATTTTCTGTTTGGTTCTTTGCCTAATGAACTTGGTGAATGTTATACACTTCAACGAGTTCGTTTAGGACAAAACTTTTTAACCGGTTCGATACCAAAAGGTTTTCTTTATTTGCCTCAACTTTCACTTCTTGAACTTCAAAACAATTATCTTAGTGGTTTTCTTCCACCACAAGAAATGTCAAACACAAACAGTTCTTCTAAACTTGGAGAGATGAATCTTTCGAATAATCGTTTATCTGGTTCTCTACCTAGTTCTATTGGAAACTTTCCAAATTTGCAGATTATGCTTCTTCATGGAAATAGATTCTCAGGTGAAATTCCTCAAGATATAGGAAAGTTGAAGAACATTCTCAGGCTAGATATGAGTTTCAACAACTTTTCAGGAAAAATTCCTATTGAGATAGGTGAATGTTCTTTGGTTACCTATTTAGATTTGAGTCAGAATCAATTATCAGGTCCTATTCCAATTCAGCTTTCTCAAATTCACATACTTAACTATCTTAATGTCTCGTGGAACAACTTAAACCAAACACTTCCCAAGGAACTTGGTGCTATAAAAGGCTTAACCTCGGCCGATTTTTCCAATAATGACTTCTCTGGCTCAATTCCTGAAATAGGCCAATTCTCAATGTTCAATTCTACTTCCTTTATCGGTAATCCGAAGTTATGTGGATATGATTTGAATCCATGTAACCGTTCTTCGTCAACAGTATCCGAGTCTCAGGATCAAAACAACGGTCATGCAAAACCTGGAGTTTTGGTAAAGTACAAGCTTCTATTTGCATTAGCACTTCTGTTTTGTTCATTGGTTTTCGCAACACTAGCTATAATCAAAAGCCGAAAAGGAATTAGGCAAGACTCGAATTCATGGAAGTTAACAGCATTTCAGAAGATTGAATATGGAAGTGAAGATATCTTAGGTTGTATCAAGGAAAGTAACATCATAGGAAGAGGAGGTGCTGGTGTTGTATATGGGGGCACAATGCCAAATGATGAAAAAATAGCTGTGAAAAAGTTACTAGGAATTAACAAAGGTTGTTCTTATGATAATGGTTTATCAGCTGAAATAAAAACACTTGGTAGAATAAGGCATAGATACATTGTGAAGTTGTTAGCATTTTGTTCAAATAAAGATACAAATTTGCTTGTTTATGAGTATATGACAAATGGAAGTTTAGGTGAAGTTTTGCATGGTAAAAGAGGGGGGTATCTTGAGTGGAATGTAAGGGTGAAAATAGCAATTGAAGCTGCTAAAGGACTATGTTATTTGCATCATGATTGTTGTCCTATGATTGTTCATAGAGATGTTAAGTCAAATAATATTTTGTTGGATTCTGAATTTGAAGCTCATGTTGCTGATTTTGGACTTGCTAAGTTCTTGTTGCAAGAGAATAATGGTGGAACTTCTGAATGCATGTCTTCTATTGTTGGTTCTTATGGCTACATTGCTCCAGAATATGCATACACATTGAAAGTGGATGAGAAAAGTGATGTATATAGTTTTGGAGTGGTGCTACTAGAACTACTAACAGGTAGAAGACCAGTTGGAGATTTTGGTGAAGAAGGAATGGATATTGTTCAATGGACAAAGTTACAAACTGAATTGAACAAAGAAAAAGTTGTGAAGATTCTTGATAAGAGATTACATCACAATATTCCTTTGGATGAAGCAATGCAATTATTCTTTGTGGCTATGTTATGTGTTCAAGAACAAAGTGTGGAAAGACCAACTATGAGGGAAGTTGTTGAAATGCTAGTACAAGCAAAGCAACCAAATATATTTCAAATGTAG 2943 0.3408 MDSPTFTFVLYTLFLLCLNTTLSTSSSSSSSSSSSSLPMSLKTQATILVSLKQDFEPNTSLKTWNISNYMSLCSWYGIQCDTNNTSIVSLDISNLNISGTFSSSITKLSNLKFLNISNNLFNGNLSWKFSYFKDLEVFDAYNNEFNCSLPIEVTKLPKLKYLNLGGNFFNGEIPSSYGNMLSLNYLSLAGNDLRGFIPYELGNLTNLTHLLLGYYNVFDGEIPSHFGNLVNLVHLDLANCGLKGSIPNELGKLYKLDTLFLQTNQLSGSIPSQLGNLSSLKSLDMSNNELSGNIPNEFSNLHELTLLNLFINKLYGEIPSFVSELPNLEVLKLWHNNFTGSIPSKLGQNGKLSELDLSTNKLTGLVPKSLCIGKKLKILILLNNFLFGSLPNELGECYTLQRVRLGQNFLTGSIPKGFLYLPQLSLLELQNNYLSGFLPPQEMSNTNSSSKLGEMNLSNNRLSGSLPSSIGNFPNLQIMLLHGNRFSGEIPQDIGKLKNILRLDMSFNNFSGKIPIEIGECSLVTYLDLSQNQLSGPIPIQLSQIHILNYLNVSWNNLNQTLPKELGAIKGLTSADFSNNDFSGSIPEIGQFSMFNSTSFIGNPKLCGYDLNPCNRSSSTVSESQDQNNGHAKPGVLVKYKLLFALALLFCSLVFATLAIIKSRKGIRQDSNSWKLTAFQKIEYGSEDILGCIKESNIIGRGGAGVVYGGTMPNDEKIAVKKLLGINKGCSYDNGLSAEIKTLGRIRHRYIVKLLAFCSNKDTNLLVYEYMTNGSLGEVLHGKRGGYLEWNVRVKIAIEAAKGLCYLHHDCCPMIVHRDVKSNNILLDSEFEAHVADFGLAKFLLQENNGGTSECMSSIVGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELLTGRRPVGDFGEEGMDIVQWTKLQTELNKEKVVKILDKRLHHNIPLDEAMQLFFVAMLCVQEQSVERPTMREVVEMLVQAKQPNIFQM* 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3368 980 PANTHER UNNAMED PRODUCT 96 977 - -
Tpr4g3368 980 PANTHER UNNAMED PRODUCT 10 111 - -
Tpr4g3368 980 Pfam Leucine rich repeat N-terminal domain 42 81 IPR013210 -
Tpr4g3368 980 ProSiteProfiles Protein kinase domain profile. 693 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g3368 980 Gene3D Ribonuclease Inhibitor 351 618 IPR032675 -
Tpr4g3368 980 SUPERFAMILY RNI-like 89 439 - -
Tpr4g3368 980 SMART LRR_typ_2 229 253 IPR003591 -
Tpr4g3368 980 SMART LRR_typ_2 325 349 IPR003591 -
Tpr4g3368 980 SMART LRR_typ_2 421 445 IPR003591 -
Tpr4g3368 980 SMART LRR_typ_2 156 180 IPR003591 -
Tpr4g3368 980 SMART LRR_typ_2 277 300 IPR003591 -
Tpr4g3368 980 SMART LRR_typ_2 473 497 IPR003591 -
Tpr4g3368 980 Pfam Protein kinase domain 695 967 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g3368 980 Gene3D Transferase(Phosphotransferase) domain 1 771 978 - -
Tpr4g3368 980 Gene3D Ribonuclease Inhibitor 276 350 IPR032675 -
Tpr4g3368 980 Gene3D Ribonuclease Inhibitor 198 275 IPR032675 -
Tpr4g3368 980 Gene3D Ribonuclease Inhibitor 41 197 IPR032675 -
Tpr4g3368 980 Pfam Leucine Rich Repeat 158 176 IPR001611 GO:0005515
Tpr4g3368 980 Pfam Leucine Rich Repeat 231 253 IPR001611 GO:0005515
Tpr4g3368 980 Pfam Leucine Rich Repeat 279 301 IPR001611 GO:0005515
Tpr4g3368 980 SMART serkin_6 693 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g3368 980 SUPERFAMILY L domain-like 375 614 - -
Tpr4g3368 980 ProSitePatterns Serine/Threonine protein kinases active-site signature. 815 827 IPR008271 GO:0004672|GO:0006468
Tpr4g3368 980 SUPERFAMILY Protein kinase-like (PK-like) 690 970 IPR011009 -
Tpr4g3368 980 Coils Coil 977 980 - -
Tpr4g3368 980 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3 10 111 - -
Tpr4g3368 980 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3 96 977 - -
Tpr4g3368 980 Gene3D Phosphorylase Kinase; domain 1 677 770 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3368 Tpr-Chr4 39608409 39613232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3368 30 971 Receptor kinase-like Gene Family AT5G65700 55.190 0.0 1044
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tpr4g3368 Pkinase 1.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3368 - - gmx:100816158 1422.14