Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3351 ATGGAGTTAAATTTCAACCTTAAAAACTCAAAATGGATATCAACAGTAGCAAGCATATGGATTCAATGCACAAGTGGATCACTCTACACTTTCTCAATCTACTCACAAACTCTAAAGTCAACGCAACACTATGATCAGTCAACACTCGACATTGTTTCTGTTTCCAAAGACATTGGAGTTAACGTTGGTGTTCTGTCTGGTCTCTTATATGATTTCCTTGCCACTAGAACTTCAATTGGGCCATGGATTGTTCATTTTTTGGGCTCGGCCCAATGTTTCTTGGGCTATTTTCTTATTTGGGCTGCTGTTTCCGGTCTTCTTCCTCCGGTGCCGGTGCCGATCATGTGCCTGTTTATGTTTGTGACGGCTCATGGTCAGAGTTTCTTTAACACTTCTAATGTTGTTACTGGTGTTCATAATTTCCCTAATTATAGTGGAACCATCATTGGCATCTTAAAGGGATTTCTAGGTCTAAGTGGAGCGATATTAATTCAAGTGTATCGAACAATATTCAACAACAACCCTGTGTCATATCTGCTGATGCTATCACTCTTACCACCTATCAACACTTCGATCCTTATGTGGTTTGTAAGAATCCACAACACTCATGATTCAGTGTCGGAAGAAAAGAAGTATCTCAACAAATTTTCTCTGATGGCTCTAGTTATTGCTGCATATCTTATGATTATTATAATCCTAGAGAACATCTTCACTCTACAATTGTCGATCCGCATATTTACATTCATTCTGCTTATGATGCTGTTAGCCTCGCTTCTTTGCATTGCATTTAAAGCACACGAAAAGTGCGCTTCTAATAGCGCTTCAGAAAGTTTTCTTACTGAAGGGTCCAACCTAATTGCAAGAGAAGATTCTTCCAGAAATCAACGGACTATGCGACAAGGAGAGAATCTGAATCTTTTCAAAGCAGCGAAAACGTTGAACTTTTGGATTTTGTTTGTTTCTATGGCATGTGGAATGGGATCAGGACTCGCAACGGTTAATAATATGAGCCAAATAGGAGAATCACTTGGTTATTCCACCATTGAGACAGGCTCGTTAGTAGCTTTGTATAGCATTTGGAATTTTCTTGGCCGTTTTGGAGCTGGTTATGTATCGGATTATTTTTTACACACAAGACGATGGGCAAGACCTTTATTTATGGTGATCACATTGATGATCATGAGCATTGGTCATGTCGTTATTGCTTATGGACTTCCGGGCGCTCTATATGTCGGTTCAATATTGGTTGGTATTTGTTACGGCTCTCAGTGGTCGTTAATGCCTACAATCACTTCTGAGATATTTGGTGTAGAACATATGGGAAGCATATTCAACACCATTTCCGTAGCAAGTCCGGTGGGTTCGTATATATTCTCTGTAAGAGTAGTTGGTTATATGTATGATAAAGAAGCACCGGAAGAAGGAAATATATGTGTTGGGACTCATTGTTTTATGTTTCCTTTTCTCATTATGGCATCTGCTACTTTTCTTGGTTCTCTAACAGCTTTGTGTTTGTTTTTGCGGACTAGACGCTTTTATGATCAGGTTGTTCTAGGAAGAATTCAAAATGTTCTTTGA 1578 0.391 MELNFNLKNSKWISTVASIWIQCTSGSLYTFSIYSQTLKSTQHYDQSTLDIVSVSKDIGVNVGVLSGLLYDFLATRTSIGPWIVHFLGSAQCFLGYFLIWAAVSGLLPPVPVPIMCLFMFVTAHGQSFFNTSNVVTGVHNFPNYSGTIIGILKGFLGLSGAILIQVYRTIFNNNPVSYLLMLSLLPPINTSILMWFVRIHNTHDSVSEEKKYLNKFSLMALVIAAYLMIIIILENIFTLQLSIRIFTFILLMMLLASLLCIAFKAHEKCASNSASESFLTEGSNLIAREDSSRNQRTMRQGENLNLFKAAKTLNFWILFVSMACGMGSGLATVNNMSQIGESLGYSTIETGSLVALYSIWNFLGRFGAGYVSDYFLHTRRWARPLFMVITLMIMSIGHVVIAYGLPGALYVGSILVGICYGSQWSLMPTITSEIFGVEHMGSIFNTISVASPVGSYIFSVRVVGYMYDKEAPEEGNICVGTHCFMFPFLIMASATFLGSLTALCLFLRTRRFYDQVVLGRIQNVL* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3351 525 CDD MFS_Mch1p_like 10 498 - -
Tpr4g3351 525 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 9 523 - -
Tpr4g3351 525 Pfam Major Facilitator Superfamily 318 510 IPR011701 GO:0022857|GO:0055085
Tpr4g3351 525 Gene3D MFS general substrate transporter like domains 305 512 IPR036259 -
Tpr4g3351 525 ProSiteProfiles Major facilitator superfamily (MFS) profile. 313 525 IPR020846 GO:0022857
Tpr4g3351 525 Pfam Nodulin-like 11 262 IPR010658 -
Tpr4g3351 525 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 9 523 - -
Tpr4g3351 525 SUPERFAMILY MFS general substrate transporter 221 511 IPR036259 -
Tpr4g3351 525 SUPERFAMILY MFS general substrate transporter 16 205 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3351 Tpr-Chr4 39450850 39453664 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3351 9 523 Nodulin-like Gene Family AT1G74780 54.906 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3351 - - gmx:100814668 821.231