Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr4g3338 | ATGGATAATTCAACTGAAGCATCATCATCATTGAGTTTTGTATCATCTCCTCACTTATCAAATGGTTCAAGTAATAATACTCAGAACAATGAACATGTAGCAAATATTGAAATTGTGAGTTTGAATAAGTTAAGTGGAAGCCTTGAAAAGTTATTATTAAGTGATGTTGATTATGATTATTGTGATGCTGAGATTGTTGTTGAAGAAATTCCGGTTGGTATTCATCGATGTATACTCGCGTCACGGAGTCAGTTTTTTCATGAACTTTTTAAGAAAGGGAAAGATGGAAATGTGGAGGAAGGAAAGGGAAAACCAAGGTATTACATGAAAGATTTGGTGTCTTATGGTAGTATTGGATATGAAGCTTTCATTGTTTTCTTGCATTATTTGTATACTGGAAAGTTAAAGGCTCCACCAACAGAAGTTACAACATGTGTTGATGAAGCTTGTATTCATGATGCGTGTCGTCCGGCTATTAATTATGCTTTGGAACTTATGTATGCTTCTGCCAATTTTAAGATGAAAGAGCTGGTTTTACTTTTTCAGAGGTTTCTCCTAAACTTTGTTGACAAGGCTCTTGTAGAAGATGTCATTCCTATTCTTATGGCTGCACATCACTGCACCCTAGACCAGCTTCTCTCTCCTTGCATTCAGAGAGTAGCAAGGTCTGACATGGATATTATATCTTTGGAAAGAGAACTTCCTTATGAAGTTGTGACTGAAGTCAAATCGTTCCGAGTCCAATCTCTTCCGGAATCCTCTCCCGATGCAATGGAAGTGGAACCTGTGAATGTGAATGATAAGAGTGTCAGGAAAATCCTTAAAGCATTGGATTCTGATGATGTTGAGTTACTGAAGCTTCTTTTAGAGGAATCTAGTGTGACTCTCGATGATGCTTGTGCACTACACTATGCCTGTGCACATTGTGATTCTAAGGTTGTTCAAGAAGTTCTTACTCTAGGATTAGCTGATATTCTCCTTAAGAATCCGCGCGGATACACAGTTCTTCATGTCGCAGCAAGACGAAAGGATCCATCTATTTTGGTTGCACTGCTGAAGAAAGGTGCCTGTGCATCAGAAACAACTCTTGATGGACAAACTGCTCTTTCGATTTGTCAGAGATTGACGAGGCGAAAGGATTATCATTTGAAAACAGTGCAATGGAAGGAGTCTCACAAGGATAGGCTTTGTGTCGATGTACTTGAAAGAGAAATGAGAAGAAATTCTATGTCAGTGAACATGGAAGTTTTGTCACAGTTAACTGCTGATGACTTGCACATGAGACTGGATTACCTTGAAAATAGAGTTGCATTTGCTAGGTTGATCTTTCCTGCTGAGGCTAGGGTAGCCATAGAGAATGCTGAGGCAGATTCAACGTCACTGTATGCAACTTCATCACTTTTAAAAGGCAACATAAAAGAAGTAGATCTAAACGAAACTCCTTCTGTTAGAACAAGAAAACTTCAATTAAGATTACAGTCCCTTGTAAAAACAGTTGAGAATGGCAGGCGGTTTTTTCCGCATTGTTCGGAGGTGCTTGATAAATTTCTGGAGGACGACATGCCGGATGTTTTCATCCTAGAGAAAGGCACTGAAGAAGAGCAGAGAACAAAGAAAGCACGGTTCATGGAACTTAAAGACGAGGTGCAGAAGGCCTTTCACAAAGACATGGCTGAAAATAACCATTCGGGTTTTCATTCTTCGTTGTCTTCTACATCATCCACAACTCGTCGGGAAAGTCTTAACCACAAAGTAAGGAGAAAATGA | 1767 | 0.3928 | MDNSTEASSSLSFVSSPHLSNGSSNNTQNNEHVANIEIVSLNKLSGSLEKLLLSDVDYDYCDAEIVVEEIPVGIHRCILASRSQFFHELFKKGKDGNVEEGKGKPRYYMKDLVSYGSIGYEAFIVFLHYLYTGKLKAPPTEVTTCVDEACIHDACRPAINYALELMYASANFKMKELVLLFQRFLLNFVDKALVEDVIPILMAAHHCTLDQLLSPCIQRVARSDMDIISLERELPYEVVTEVKSFRVQSLPESSPDAMEVEPVNVNDKSVRKILKALDSDDVELLKLLLEESSVTLDDACALHYACAHCDSKVVQEVLTLGLADILLKNPRGYTVLHVAARRKDPSILVALLKKGACASETTLDGQTALSICQRLTRRKDYHLKTVQWKESHKDRLCVDVLEREMRRNSMSVNMEVLSQLTADDLHMRLDYLENRVAFARLIFPAEARVAIENAEADSTSLYATSSLLKGNIKEVDLNETPSVRTRKLQLRLQSLVKTVENGRRFFPHCSEVLDKFLEDDMPDVFILEKGTEEEQRTKKARFMELKDEVQKAFHKDMAENNHSGFHSSLSSTSSTTRRESLNHKVRRK* | 589 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr4g3338 | 588 | ProSiteProfiles | Ankyrin repeat region circular profile. | 331 | 356 | - | - | |
Tpr4g3338 | 588 | SUPERFAMILY | Ankyrin repeat | 273 | 375 | IPR036770 | - | |
Tpr4g3338 | 588 | PANTHER | REGULATORY PROTEIN NPR3 | 1 | 586 | IPR044292 | GO:0009862|GO:2000022|GO:2000031 | |
Tpr4g3338 | 588 | ProSiteProfiles | Ankyrin repeat profile. | 331 | 356 | IPR002110 | GO:0005515 | |
Tpr4g3338 | 588 | Pfam | NPR1/NIM1 like defence protein C terminal | 373 | 572 | IPR021094 | - | |
Tpr4g3338 | 588 | PANTHER | REGULATORY PROTEIN, PUTATIVE-RELATED | 1 | 586 | - | - | |
Tpr4g3338 | 588 | SMART | ANK_2a | 297 | 327 | IPR002110 | GO:0005515 | |
Tpr4g3338 | 588 | SMART | ANK_2a | 331 | 360 | IPR002110 | GO:0005515 | |
Tpr4g3338 | 588 | CDD | BTB_POZ_NPR_plant | 42 | 189 | - | - | |
Tpr4g3338 | 588 | SMART | BTB_4 | 61 | 189 | IPR000210 | GO:0005515 | |
Tpr4g3338 | 588 | MobiDBLite | consensus disorder prediction | 554 | 588 | - | - | |
Tpr4g3338 | 588 | Gene3D | - | 264 | 466 | IPR036770 | - | |
Tpr4g3338 | 588 | Pfam | BTB/POZ domain | 59 | 142 | IPR000210 | GO:0005515 | |
Tpr4g3338 | 588 | ProSiteProfiles | BTB domain profile. | 61 | 139 | IPR000210 | GO:0005515 | |
Tpr4g3338 | 588 | SUPERFAMILY | POZ domain | 54 | 187 | IPR011333 | - | |
Tpr4g3338 | 588 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
Tpr4g3338 | 588 | Pfam | Ankyrin repeats (3 copies) | 279 | 356 | IPR002110 | GO:0005515 | |
Tpr4g3338 | 588 | MobiDBLite | consensus disorder prediction | 562 | 578 | - | - | |
Tpr4g3338 | 588 | Gene3D | Potassium Channel Kv1.1; Chain A | 23 | 221 | IPR011333 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr4g3338 | Tpr-Chr4 | 39377477 | 39380909 | Transposed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | TRAF | Tpr4g3338 | NPR1_like_C | 3.5e-81 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr4g3338 | K14508 | - | gmx:100814739 | 851.277 |