Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3336 ATGTGTCTTGAAAAAGTTGAATTCACTGTGAACATGACCAACGAGGAAACAGTGGCAGCTGCACTACCAATGCAAGAACATTGGCTTCCACTATCAAATCTTGATTTGATTCTTCCTCCTGTTGATGTTAGTGTGTTCTTTTGCTACAATAAACCTAGTATTACTATTGGCACCCCCCATAATATTGTTGAGTGTTTGAAAAATTCATTAGCTGAGGCTCTTGTTTCTTATTATGCCTTTGCTGGTGAAGTTGTGAAAAATTCCATGGGTGAACCTGAGTTACTTTGTAACAACCGTGGTGTGGATTTTGTTGAAGCTTTTGCTCATGTTGAATTACAATCTCTTAATTTGTATAATCCAGATGAAACTGTTGAAGGGAAGCTTGTTCCAAAAAAGAAACATGGTGTTCTTGCTGTTCAGGCAACTTGGATGAAATGTGGTGGATTAGTAGTGGCATGCACTTTTGACCATCGGATAGCTGATGCCTATTCTGCAAACATGTTTCTTGTATCTTGGGCCGAGATAGCCCGACCCAAGAATAATAAATCTTTCATTCCAACAACACAACCTTGTTTTAGGAGGTCCCTTTTGACCCCACGGCGCCCACCTTCCATTCATCCTTCACTTTATGACATGTACGTCCCCATCACTGATCTACCTCCTCCACCTGCACCTGAGCTTGAATCCGATATTAAAACCGATCCAATAATAAGTCGCATATACTATGTAACAAGTGAAGAACTCAACAACATGCAATCACTAGCCAACTCAAACAATAGTGGTAGCGTTAAGCGTTCAAAACTTGAATCCTTTTCCGCTTTACTCTGGAAAATGGTTGCTGCGGCTGCTTCAACCGATAATGAAAAAATCGTTGCAAAAATGGGGTTGGTTGTTGATGGAAGAAAGAGGCTAAGCAATGGTGACAGAAACAAGGAAGAGATTATGAGTTCATATTTTGGAAATGTGCTTTCGATTCCCTACGGTGGTAGATTGGCGAATGAGTTGGTTGAAAATCCATTAAGTTGGGTGGCAGACCGAGTTCATGATTTTCTGGAGGAGGCAGTGACGGAGGAGCATTTCTTGGGACTAATTGATTGGGTGGAAGAGCATCGACCGGTTCCAGGGTTGGCGAGGATTTACTGTGGTAGCACCGGTGGAGAAGAGGGCCCGACATTTGTGGTGTCGTCCGGCCAAAGGTTTCCCGAGTCGAAGGTGGATTTCGGATGGGGGAAGCCTGTTCTTGGATCTTATCATTTTCCTTGGGGCGGTGATGCCGGATATGTTATGCCAATGCCTAGTCCTAAAAGGAATGGTGATTGGTTGCTCTATATGCACCTTCCTAAGACACACTTGCACTACATGGAGGCTCGAGCTCCTCATTTCTTTAGACCAATCTCTTGGGATTACCTTCTCAATTAA 1419 0.4313 MCLEKVEFTVNMTNEETVAAALPMQEHWLPLSNLDLILPPVDVSVFFCYNKPSITIGTPHNIVECLKNSLAEALVSYYAFAGEVVKNSMGEPELLCNNRGVDFVEAFAHVELQSLNLYNPDETVEGKLVPKKKHGVLAVQATWMKCGGLVVACTFDHRIADAYSANMFLVSWAEIARPKNNKSFIPTTQPCFRRSLLTPRRPPSIHPSLYDMYVPITDLPPPPAPELESDIKTDPIISRIYYVTSEELNNMQSLANSNNSGSVKRSKLESFSALLWKMVAAAASTDNEKIVAKMGLVVDGRKRLSNGDRNKEEIMSSYFGNVLSIPYGGRLANELVENPLSWVADRVHDFLEEAVTEEHFLGLIDWVEEHRPVPGLARIYCGSTGGEEGPTFVVSSGQRFPESKVDFGWGKPVLGSYHFPWGGDAGYVMPMPSPKRNGDWLLYMHLPKTHLHYMEARAPHFFRPISWDYLLN* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3336 472 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 466 - -
Tpr4g3336 472 Gene3D - 224 456 IPR023213 -
Tpr4g3336 472 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 8 466 - -
Tpr4g3336 472 Pfam Transferase family 9 456 - -
Tpr4g3336 472 Gene3D - 4 211 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3336 Tpr-Chr4 39360790 39362832 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3336 10 455 Monolignol Biosynthesis Gene Families AT5G48930 25.546 1.73e-36 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3336 - - cam:101501659 805.053