Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3333 ATGGTAGTGAAGGTGTACGGTCCTCACTGTGCCTCAACCAAAAGAGTGTTGGTTTGTCTTGTTGAGAAGGAAATAGAATTTGAGGTTGTCCCTATTAATTTCTTGGAAGGGGAACAGAAGAATCCTGAGTACCTCAAATTACAGCCTTTTGGAACTGTTCCTGTAATTCAAGATGGAGACTATGCCCTTTATGAATCTCGTGCAATAATGAGATATTATGCTGAAAAATATAGATCTCAAGGGATTGAATTACTTGGAAAGACAATAGAAGAAAAAGGTCTAGTGGAACAATGGCTAGAAGTTGAAGCACAAAACTTTAACCCATCAGCATACAACTTGGCCCTTCATGTATTATTTCCTTCACTACTAGCTGATAACACTCCAAATCCTAAGGTAATTGAAGAGAGTGAAGCAAAACTTGTGAAGGTTTTGAACATTTATGAAGAGAGACTATCAAAGAGCAAGTATTTGGCTGGTGATTTCTTTAGTCTTGCTGATATAAGTCATCTTCCATTTACTGATTATATTGTTAACCAAATGGGGAAAGAGTATTTGATTAAGGATAAGAAACATGTTAGTGCTTGGTGGGATGATATAAGTAGTAGACCATCATGGAAAAAAGTGCTCGAGTTATATAGTCCTCCGATTTAA 651 0.3671 MVVKVYGPHCASTKRVLVCLVEKEIEFEVVPINFLEGEQKNPEYLKLQPFGTVPVIQDGDYALYESRAIMRYYAEKYRSQGIELLGKTIEEKGLVEQWLEVEAQNFNPSAYNLALHVLFPSLLADNTPNPKVIEESEAKLVKVLNIYEERLSKSKYLAGDFFSLADISHLPFTDYIVNQMGKEYLIKDKKHVSAWWDDISSRPSWKKVLELYSPPI* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3333 216 CDD GST_N_Phi 2 76 - -
Tpr4g3333 216 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 216 IPR010987 -
Tpr4g3333 216 CDD GST_C_Phi 90 209 IPR034347 -
Tpr4g3333 216 PANTHER GLUTATHIONE S-TRANSFERASE RHO 2 216 - -
Tpr4g3333 216 SUPERFAMILY GST C-terminal domain-like 72 213 IPR036282 -
Tpr4g3333 216 Pfam Glutathione S-transferase, N-terminal domain 4 74 IPR004045 -
Tpr4g3333 216 SUPERFAMILY Thioredoxin-like 6 81 IPR036249 -
Tpr4g3333 216 Pfam Glutathione S-transferase, C-terminal domain 113 203 IPR004046 -
Tpr4g3333 216 SFLD Main (cytGST) 4 202 - -
Tpr4g3333 216 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 2 216 - -
Tpr4g3333 216 SFLD Glutathione Transferase (cytosolic) 4 202 IPR040079 -
Tpr4g3333 216 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 81 IPR004045 -
Tpr4g3333 216 Gene3D Glutaredoxin 1 85 - -
Tpr4g3333 216 Gene3D - 86 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3333 Tpr-Chr4 39322430 39324517 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3333 1 216 Glutathione S-transferase Gene Family AT2G30870 58.796 1.10e-92 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3333 K00799 - gmx:547951 367.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3333 4 39322430 39324517 Tpr4g3333 4 39322430 39324517 ECH
Tpr3g4270 3 47550979 47552842 Tpr4g3333 4 39322430 39324517 PCT