Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3331 ATGATGCTGAAAATGAAGGTTTCCAGTAATCACGCGATTCAAGATCTGATGACAGCTATATACTCAAACAGAATGAGGGATGGAGTCCTTGAAGCACATGCCACTGTACTTGTTAATACTGGTCTAGAAGTTGACAAAACTCGGGATACTCTACCCTTACGGTTGCTTCTGGAGGCCTTTGTACACTTGTTTTTGTGGTGCCTTAATGAACTCGCGAAGATCATGGAATGTACGGCAACAAACGAGAAACAAATTGCTTTTCCAATTTTTTACCATGTTGATCCATCGGATGTACGACATCAAAGAAACAGCTATGGCAAAGCCATGGTTGCTCATAAGGATAGGTTTGGAAAAGACTCGGAAAAACTAAAAGCATGGACAGAAGCATTGTCTGATGTTGCAAACTTGAAAGGTCACCATATCGACACTGGGTTCGAAATCAATCATGTTAAAGAAATTGCCGAAAAGGTCCATGCTAAGATAGCTCCTAAATCTTTACTTGTTGGTGAGTATCCGGTTGGACTTGAACACCACATAGAAGATGCGAAGTCACTTCTAGACTTGAATCCAAATGTGGATATTGTATGCATGTTGGGCATATATGGACTTGGTGGAATAGGGAAAACAAGTCTAGCCAAAGCATTGTATAACAAGATTACGCACCAATTTCAAGCTGCATGTTTTCTTGCCAATGTTAGAGAGAAATCAAACAATATCAAGGGCTTGGAAGATTTACAGCAGACACTTTTATCAGAGATGTTTGAGCAGTCGGATTCCAAGTTGGGAAGTACAAGTAGAGGAATCAACGAAATAAAAGTCAAGCGTGGAAAGAAAAAAGTTCTTTTGGTTCTTGATGATGTTAATGAGATGGAACAATTAGATAACTTGGCAGGAGGAAGTGATTGGTTTGGTCCAGGTAGCAGGATCATTATAACTACAAGGGACAAAGGTTTGCTCATTGCTACTCATCAAATAGAGGTTAAGACTTATGAAATGATTGAACTTAATGATCAACATTCTCTTGAGTTGTTTTGTAGATATGCCTTCGGAAAAAGCAATCCTAAATCCGGATATGAAGCTATTTCTTCTCGTGTTGTTGGTTATGCGAAAGGTCTTCCATTGGCTCTAAAAGTTATAGGCTCCAATTTGGCTACAAGAAAAAGTTTAAAAGCATGGGACCATGCATTGAAAGATTATGAGAGGATTCCACGTAAAGGGATTCAAGATGTGCTTAAAGTAAGCTATGATGTGTTGGAGCCTTATGCACAAAGTGTTTTCCTAGATATAGTTTGCTTCTTCAAAGGGGAAAGCATAGAATATGTTGAAGAAATACTTGATGAATTCAGTGCAGCATCAAATATTGAAGAGCTCGTTAATAAATCTCTCTTGAATGTTGATAATGGATACTTGAATATGCATGACCTAATACAGGACATGGGTAGAGAAATTGTTAGGCAAGAGGCACCAAATAATCCTGCAAAACGTAGTAGATTATGGTTTCATCAAGATGTCATTGATGTATTATCAGCCAATGATTCGGGGAGTGATGCAATTCAAGGGATAATGCTTGATCCTCCTAATTATGCGACAAAAGTATATTGGAATGCTTCTTTTTTTGAGAAGATGAATAGTCTCAGAATTCTCATTGTTCGACATACAACTTTTTCATCAGAGCCTATAGATCTACCAAATCATTCAAGGCTACTTGAATGGGAGGCTTACCCATCAAAGACTTTCCCACCACAGTTTTATCCGAGGAATATCATCATCTTAAATTTGCTTCATACTCAACTAATTACAATGGAACAACCATTTAAGCAATTTTCATATCTAACTGTCATGAATTTCTCATTTTCATCTATCACAACAATGCCGGATGTGTCCAATGTTAAAAATTTGAGAGAATTGGTACTTGTTTGCTGTTGGAACTTAACTACGGTTCATGAATCCATTGGATTTCTCAAACATCTTGTCCGCATAAGTGCTAAGGGATACAGAAAACTTAAAAACTTTCTGCAAAGAATGTATTTACCATCTCTAGAAGTCCTTGACCTAAGTTCGTGTGAAAACCTTGAACACTTCCCAGATATATTGAACGAGATGAATAAACCATTGAAGATTTGTATGTCGTATACCTCTATTAAGAAGCTTCCAAATTCCGTTGGTAATCTTATTGGACTTGTTTCAATAGATATGTTAAACGGTAATCGCAAATATCTACCAAGTAGCTTATTAAGGTTACCAAAGGTTGTTGCTTTTAAATTTGGAGGATGTTCTAAACTTGGTGAATCTTTCAGAAGATTTTTATTTGATAACCCTTCAGAAGCCAATGAACATTCAACATTAAAAATAATGCATCTTCACGAAATTAATTTGTCAGATGAAGATATTCAGGCAATTCTCATATGTTTTCCAAAATTAGAAGAATTGAGTTTAACACTTAGTTGCAATCTGGTCTCTCTCCCAGCGTGCATTAAAGAGTCTAATCACTTGACATATCTTAATGTTACTTTGTGCTTCCATCTTGAAAAAATTCCCGAATGCACCAACTTGAGAATTCTGGATGTCAGTGATTGTAGTAGTCTTATACACATTTCTGAGTTGCCATGCACTATTCAAAAAATAAATGCAAGAGGATGCTTCAACTTGTCTCGGGAGACAAGAAACATGCTATGGGATCAGATGAAAAAAAAGAGGCATGGATTAGAAATTGTGATGCCTAGACAATTCAAGGTTCCAAAATGGTTCGATTACAAATGCAAAGGAGGAATTCCGTGTTTATGGGTTCGTGAGAAGTTTCCCATTAATGTTGCTTTTGCATTGGTGTTCCAAGCTGCTGCATATGGGATCAAAAGAATAGATCTCGATTTTGTTAAACTTCATTTGGTTATCAACGGTCAATCTGTCCCTCACAAAGGCTATTACAACTTGGACATTAGACATAATCATGTTTTAGTTTGTGATCTACGACTCTTATGCAATGACGAGGAGTGGCTAAGCCTTGATGCATTACTTCTCAAGTATGAATGGAATCAAGTGCAAATTTCATATGAATTCAAGTACAGTCCATATGAAGCCTTGGACTGGGACCATATCACACTACAAGAAAACAAGGTTTATGTGACTGGATGA 3132 0.3704 MMLKMKVSSNHAIQDLMTAIYSNRMRDGVLEAHATVLVNTGLEVDKTRDTLPLRLLLEAFVHLFLWCLNELAKIMECTATNEKQIAFPIFYHVDPSDVRHQRNSYGKAMVAHKDRFGKDSEKLKAWTEALSDVANLKGHHIDTGFEINHVKEIAEKVHAKIAPKSLLVGEYPVGLEHHIEDAKSLLDLNPNVDIVCMLGIYGLGGIGKTSLAKALYNKITHQFQAACFLANVREKSNNIKGLEDLQQTLLSEMFEQSDSKLGSTSRGINEIKVKRGKKKVLLVLDDVNEMEQLDNLAGGSDWFGPGSRIIITTRDKGLLIATHQIEVKTYEMIELNDQHSLELFCRYAFGKSNPKSGYEAISSRVVGYAKGLPLALKVIGSNLATRKSLKAWDHALKDYERIPRKGIQDVLKVSYDVLEPYAQSVFLDIVCFFKGESIEYVEEILDEFSAASNIEELVNKSLLNVDNGYLNMHDLIQDMGREIVRQEAPNNPAKRSRLWFHQDVIDVLSANDSGSDAIQGIMLDPPNYATKVYWNASFFEKMNSLRILIVRHTTFSSEPIDLPNHSRLLEWEAYPSKTFPPQFYPRNIIILNLLHTQLITMEQPFKQFSYLTVMNFSFSSITTMPDVSNVKNLRELVLVCCWNLTTVHESIGFLKHLVRISAKGYRKLKNFLQRMYLPSLEVLDLSSCENLEHFPDILNEMNKPLKICMSYTSIKKLPNSVGNLIGLVSIDMLNGNRKYLPSSLLRLPKVVAFKFGGCSKLGESFRRFLFDNPSEANEHSTLKIMHLHEINLSDEDIQAILICFPKLEELSLTLSCNLVSLPACIKESNHLTYLNVTLCFHLEKIPECTNLRILDVSDCSSLIHISELPCTIQKINARGCFNLSRETRNMLWDQMKKKRHGLEIVMPRQFKVPKWFDYKCKGGIPCLWVREKFPINVAFALVFQAAAYGIKRIDLDFVKLHLVINGQSVPHKGYYNLDIRHNHVLVCDLRLLCNDEEWLSLDALLLKYEWNQVQISYEFKYSPYEALDWDHITLQENKVYVTG* 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3331 1043 Gene3D Ribonuclease Inhibitor 535 706 IPR032675 -
Tpr4g3331 1043 Gene3D Ribonuclease Inhibitor 707 901 IPR032675 -
Tpr4g3331 1043 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 66 1026 IPR044974 GO:0006952
Tpr4g3331 1043 Gene3D - 160 327 IPR027417 -
Tpr4g3331 1043 SUPERFAMILY L domain-like 485 885 - -
Tpr4g3331 1043 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 166 429 IPR027417 -
Tpr4g3331 1043 Pfam TIR domain 66 157 IPR000157 GO:0007165
Tpr4g3331 1043 Gene3D - 334 419 IPR042197 -
Tpr4g3331 1043 SUPERFAMILY Toll/Interleukin receptor TIR domain 66 138 IPR035897 -
Tpr4g3331 1043 Pfam NB-ARC domain 176 418 IPR002182 GO:0043531
Tpr4g3331 1043 Gene3D - 64 159 IPR035897 -
Tpr4g3331 1043 PRINTS Disease resistance protein signature 197 212 - -
Tpr4g3331 1043 PRINTS Disease resistance protein signature 274 288 - -
Tpr4g3331 1043 PRINTS Disease resistance protein signature 369 383 - -
Tpr4g3331 1043 PRINTS Disease resistance protein signature 675 691 - -
Tpr4g3331 1043 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 66 1026 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3331 Tpr-Chr4 39292346 39313228 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3331 49 794 WRKY Transcription Factor Family AT4G12020 29.870 6.36e-71 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3331 - - mtr:MTR_5g090940 1213.36