Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3329 ATGGAAAATTATGAAGAACAGTCACATGGTTTCACTTATGATGTTTTCCTCAGTTTTAGAGGGGAAGACACGCGGCACAATTTTATTGGATATCTTCGTGATGCATTGCGGCAGAGGAGAATCAATGCTTTCTTTGATGATGCGAATCTGGAATTAGGAGAAGACATTTCACCTGCCCTTTTAAAAGCCATTAAAGAATCTAAGATCTTAGTTATTGTTTTTTCTGAGAATTACGCATCTTCCGGGTGGTGTCTTAGGGAACTAGTGAAGATCATGGAATGTAGGGAAAAAAACAATAAACAAATCGCTTTCCCAATTTTTTACCATGTTAATCCATCTGATATACGACGTCAAAGAAATAGCTATGGAGAAGCCATGGTTGTTCATCAGAATACGTTTGGAAAAGACTCGGAAAATATAAAGGCATGGACAACAGCATTGTCTGAAGCTGCAAACTTGAAAGGTCACCACATCCACACCGGGTTCGAAATCGATCATGTTACAGAGATTGCCAAAGAGATTGCCAAAAAGGTCCATGCTAAGATAGCTCCTAAACCTTTACCTGTTAGTGAGAAACTATATGGACTTGATCAACACATAGAAGAAGTGAAGTCACTTCTAGACTTGAAACCAAATGATGACACTGTATGCTTGTTGGGCATAATTGGACTTGGCGGAATAGGGAAAACTGAACTTGCCAAAGCACTGTATAACAAGATTGTGCACAAATTTGAAGCTGCAAGTATACTTGAAAATGTTAGAGAGAAGTGGAACAGAATCAATGGCCCAGAATATCTACAAAAGACCCTTTTATTAGAGATGTTTGAGGAGCCAGAAACTGCGTGGGGAAGTACAAGTAAAGGAATCAAAGAAATAAAACACAAGCTTGGAAGGAAAAAGGTTCTTTTGGTACTTGACGATGTTGATGAGATGAAACAATTAGAAAACTTGGCAGGAGGAAGTGATTGGTTTGGTCCAGGTAGTAGGATCATAATAACTACAAGGGATAAAGGTTTGCTCGTGGGTACTTATTTAATAGAGGTTAAGACTTATGAAATGACTGGACTTAATGATCAACATTCTCTTGAGTTGTTTTGTAGAAATGCATTTGGAAAAAACAATCCTAAAACAGGATATGAATCTATGTCTTCTCGCGCGGTTGGTTATGCGAAAGGTCTTCCATTGGCTTTAAAAGTTATAGGCTCCAATTTGTCTACTAGAAAAAGTTTAAAAGCTTGGGAGAATGCATTGAAAGATTATGAGAGGATTCCACTGAAAGCGATTCAAGATGTGCTTAAATTAAGCTATGATGTGTTGGAGCATTATGCACAAAGTGTTTTCCTAGATATAGCTTGCTTCTTCACAGGGAAAAGCGTGGAATATGTTGAAGAAATACTTTATGAATTCAGCGCAGCATCAAATATTGAAGAGCTTGTTAATAAAGGTCTCTTGAATGTCGATAATGGCCACTTGAATATGCATTACCTAATACGTGATATGGGTAGAGAGATTGTTAGGCAAGAGGCACCAAATAATCCTGCAAAACGTAGTAGATTATGGTTTCATCAAGATGTCATTGATGTATTATCGGCCAACGATTCAGGGTGTGATGCAATTCAAGGGATAATGCTTGAACCTCCTGAATATACAACAGAAGTATATTTGAATGATTATACTTTTGAGAAGATGAACCGTCTCAGAATTCTCATTGTTAAAAATATATATGTTTCATCAGAGCCTAAACATCTTCCAAATCATTTAAGGCTACTTGACTGGAAGGAATACCCTTCAAAGACTTTCCCACCAAAATTTTATCCGAGAAATATCATCATCTTAAATTTGCCTGATAGTCAACTTACAATGGAAGAGCCATTTAAGCAATTTACGTATCTGACTGTCATGAATTTCTCAAATAATCAATCTATCACAACAATGCCTGACGTGTCCAAAGTTGAAAATTTGAGAGAATTGCGACTTGATGATTGTAAGAACTTAACTACTGTTCATGAATCCATTGTATTTCTCCAACGTCTTGTTCACTTAAGCGCTTTGGGATGCACCAAACTTGAAATCTTTCCGCAAAGAATGTTTTTACCATCTCTAGAAGTCCTTGACCTTGATTGGTGTAAAAAACTTGAACACTTCCCAGATATAGTGAACAAGATGAATAAACCATTGAAGATTCGTATGAGTCATACCTCTATTAAGAAGCTGCCAAATTCTGTCGGTAATCTTATTGGACTTGTTTCAATAGACATGGAACATAGTGAGAAACTCGAATATCTACCAAGTAGCTTATTCAGTTTACCAAATGTTGTTGCTTTTGACTTTGGAAGTTGTTCTAAACTTGGTGGATCTATCAAAAGATTTCTACCTGATAGCCCTTCAGAAGGCAATGAATGTTCAACATTAAAAACAATGCATTTTGAAAAAAGCAGTTTGTCAGATGAAGATATGCAGGCAATACTCATATGTTTTCCAAAATTAGAAGAATTGTTTGTATCAAAGAACAATTTGGTCTCTCTGCCAGCGTGCATTATAGGGTCTACTCACTTGACAAATCTTGATGTCAGTGATTGCAAAATGCTTAGAGAAATTCCCCAATGCACCAACTTGAGAATTCTGGATGTCCATGGTTGTACGAGCCTTACAGATATTTCAGAGTTGCCATGCACAATTCAAAAAATAGATGCAATAAATTGCTTCAACTTATCTTCGGATACATCAGACATGCTATGGGATCAGGTGAAAAAAGAGAGGAGTGGATTAGAAATTGTGATGCCTAGAACCAATGTTCCAAAATGGTTCGATTATAGACGCGAAAGAGGAATTCCGTGTTTATGGGTTCGTGAGAAGTTTCCCATTAATGTTGCTTTTGCATTGGTGTTCCAAGCTGTTGCAGATGGGATCAAAAGAATAGATCTCGATTTTGTTAAACTTCATTTGGTTATCAACGGTCAACGTGTCCCTCACAAAAGCAATTACAACATCATGATTGAACCAAATCATGTTTCAGTTTGTGATCTACGATTGTTATACAATGATGACGAGTGGCTAAGCATTGATGCATTACTTCTTAAGCATAAATGGAATAAAGTGCAAATTTCATATGAAGCGGAGAATAGTATCGTGACACTAAGTGAATGGGGAATTTTTGTGTACAAACAAGGAACTGATAACTTGGAAGAACATGTTCAATTCCTGTGTCCTATGCCTGTTATTGGTCAAGATTCTGGATCTCCTTCTACCGTTGCTATGGATGTGGTATCTTCCTCCGAGTTCAGGGAATTCAAGGAAGAGATAAGAGGAGAGATGGCCACTCAAAAGGACAATCAAGCTGCTATGAAGAATCAGTTGGATACCATACAGCAGCTCTTGTTGACTTTAGCCTCCAAACAAACCTAG 3405 0.373 MENYEEQSHGFTYDVFLSFRGEDTRHNFIGYLRDALRQRRINAFFDDANLELGEDISPALLKAIKESKILVIVFSENYASSGWCLRELVKIMECREKNNKQIAFPIFYHVNPSDIRRQRNSYGEAMVVHQNTFGKDSENIKAWTTALSEAANLKGHHIHTGFEIDHVTEIAKEIAKKVHAKIAPKPLPVSEKLYGLDQHIEEVKSLLDLKPNDDTVCLLGIIGLGGIGKTELAKALYNKIVHKFEAASILENVREKWNRINGPEYLQKTLLLEMFEEPETAWGSTSKGIKEIKHKLGRKKVLLVLDDVDEMKQLENLAGGSDWFGPGSRIIITTRDKGLLVGTYLIEVKTYEMTGLNDQHSLELFCRNAFGKNNPKTGYESMSSRAVGYAKGLPLALKVIGSNLSTRKSLKAWENALKDYERIPLKAIQDVLKLSYDVLEHYAQSVFLDIACFFTGKSVEYVEEILYEFSAASNIEELVNKGLLNVDNGHLNMHYLIRDMGREIVRQEAPNNPAKRSRLWFHQDVIDVLSANDSGCDAIQGIMLEPPEYTTEVYLNDYTFEKMNRLRILIVKNIYVSSEPKHLPNHLRLLDWKEYPSKTFPPKFYPRNIIILNLPDSQLTMEEPFKQFTYLTVMNFSNNQSITTMPDVSKVENLRELRLDDCKNLTTVHESIVFLQRLVHLSALGCTKLEIFPQRMFLPSLEVLDLDWCKKLEHFPDIVNKMNKPLKIRMSHTSIKKLPNSVGNLIGLVSIDMEHSEKLEYLPSSLFSLPNVVAFDFGSCSKLGGSIKRFLPDSPSEGNECSTLKTMHFEKSSLSDEDMQAILICFPKLEELFVSKNNLVSLPACIIGSTHLTNLDVSDCKMLREIPQCTNLRILDVHGCTSLTDISELPCTIQKIDAINCFNLSSDTSDMLWDQVKKERSGLEIVMPRTNVPKWFDYRRERGIPCLWVREKFPINVAFALVFQAVADGIKRIDLDFVKLHLVINGQRVPHKSNYNIMIEPNHVSVCDLRLLYNDDEWLSIDALLLKHKWNKVQISYEAENSIVTLSEWGIFVYKQGTDNLEEHVQFLCPMPVIGQDSGSPSTVAMDVVSSSEFREFKEEIRGEMATQKDNQAAMKNQLDTIQQLLLTLASKQT* 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3329 1134 PRINTS Disease resistance protein signature 218 233 - -
Tpr4g3329 1134 PRINTS Disease resistance protein signature 295 309 - -
Tpr4g3329 1134 PRINTS Disease resistance protein signature 390 404 - -
Tpr4g3329 1134 PRINTS Disease resistance protein signature 696 712 - -
Tpr4g3329 1134 Gene3D - 179 344 IPR027417 -
Tpr4g3329 1134 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 20 1060 - -
Tpr4g3329 1134 ProSiteProfiles TIR domain profile. 11 182 IPR000157 GO:0007165
Tpr4g3329 1134 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 155 IPR035897 -
Tpr4g3329 1134 SMART till_3 12 153 IPR000157 GO:0007165
Tpr4g3329 1134 Gene3D Ribonuclease Inhibitor 728 919 IPR032675 -
Tpr4g3329 1134 Gene3D Ribonuclease Inhibitor 551 727 IPR032675 -
Tpr4g3329 1134 Gene3D - 355 440 IPR042197 -
Tpr4g3329 1134 Gene3D - 12 178 IPR035897 -
Tpr4g3329 1134 SUPERFAMILY L domain-like 493 903 - -
Tpr4g3329 1134 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 1060 IPR044974 GO:0006952
Tpr4g3329 1134 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 450 IPR027417 -
Tpr4g3329 1134 Pfam NB-ARC domain 197 439 IPR002182 GO:0043531
Tpr4g3329 1134 Pfam TIR domain 13 178 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3329 Tpr-Chr4 39254621 39261733 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3329 4 794 WRKY Transcription Factor Family AT4G12020 30.366 2.33e-83 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3329 - - mtr:MTR_5g090940 1400.19