Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3324 ATGACACAGAAAAAACAGCAGCGCAGAAAGAACGGAGAAGATGGAAGAGAGGCGGTTCTGCAACTCAGAGAAAGGTGGTGCCTTGATGAACTCGCAAAGATCATGGAATGTACGAGAAGAAACAACAAACAAATTGCTTTTCCAATATTTTTCCATGTTGATCCATCGGATGTACGACATCAAAGAAAGAGCTATGGAGAAGCCATGGTTGCTCATGAGACGAGGTTTGGAAAAGAGTCAGAAAAAATAAAAGCATGGAGAGCAGCATTGTCTGAAGTGGCAGACTTGAAAGGTCACCACATCCACACCGGGTTCGAAATCAATCATGTTAAAGAGATTGCCGAAAAGGTCCATGCTAAAATACCTCCTAAATCTTTACTTGTTGGTGAGTATCCAGTTGGACTTGATCAACACATAGAAGATGCGAAGTCACTTCTAGACTTGAAGTCAAATGACGATATTGTATGCATGTTGGGGATATATGGACTTGGTGGAATTGGGAAAACAAGTCTCGCCAAAGCATTGTATAACAAGATTGCGCACCAATTTCAAGCTGCATGTTTTCTTGCCAATGTTAGAGAGAAATCAAACAAAATCAGTAGCTCAGAAGATTTACAGCAAACACTTTTATCAGAGATGTTTGAGCAGCCAGATTCCAAGTTGGGAAGTACAAGTAAAGGAATCTATGAAATAAAACTCAAGCTTGGAAAGAAAAAGGTTCTTTTGGTTCTTGATGATGTTGATGAGATGGAACAATTAGAAAACTTGGCGGGAGGAAGTGATTGGTTTGGTCCAGGTAGTAGGATCATTATAACTACAAGGGACAAAAGTCTGCTCATTGGTACTCATCAAATAGAAGTTAAAACTTACGAAATGATTGGACTTAATGATCAACTTTCTCTTCAGTTGTTTTGTCGACATGCCTTTGGTAAAAGCTATCCTAAAACAGAATATGAAGATATTTCATCTCGCGCGGTTCGTTGTGCGAAAGGTCTTCCTTTGGCTTTAAAAGTTATAGGCTCCAATTTGCGTACTAGAAAAAGTTTAAAAGCTTGGGAGGATGCATTGAAATATTATGAGAGGATTCCCCGTAAAGAGATTCAAGATGTCCTTAAAGTAAGCTATGATGTGTTGGAACCTTATGCACAAAGTGTTTTCCTAGATATAGCTTGCTTCTTCAAAGGGGAAAGCGTAGAATATGTTAAAGAAATACTTGAAGAATTCGGTGCGGCATCAAATATTGAAGAGCTTGTTAATAAATCTCTCTTGAATGTTGATAATGGATACTTGAGTATGCATGATGTAATACAAGATATGGGTAGAGAGATTGTTAGGCAAGAGGCACCAGATAATCCTGCAAAACGTAGTAGATTATGGTTTCATCAAGATGTCATTGATGTGTTATCCTCCAACGATTCTGGGCATGATGCAATTCAAGGGATAATGTTTGATCCTCCTGCAGATCGTTACCCTTATTGGCATAATGCTTTTGAGAAGATGCACCAGCTTAGAATTCTCATTGTTCGATGTACAACTTTTTCATCAAAGCCTAAACATCTTCCAAATCATTTAAGGATACTTGACTGGGAGAAATACCCTTCAAAAACTCTGCCACCAAAATTTTATCCGAAGAATATCATCATCTTAAATTTGCGTGGTAGTCAACTTACCATAAAAAAACCATTTGAGCAATTTTCCTGTTTGACTGTCATGAATTTCTCAGATAATAAATCTATCAAAACGATGCCCGATGTGTCCAAAGTTGAAAATTTGAGAGAATTGCGACTTGATCGTTGTGTGAACTTAACTACGGTTCATGAATCCATTGGATTTCTCAAACATCTTGTCCACTTAAGCGCTGTGGGATGCTATAAACTTAAAAACTTTCCGCAAAGAATGTTTTTACCATCTCTAGAAGTCATTGAACTTTATTGGTGTGAAAAACTTGAACACTTCCCAGATATAGTGAACGAAATGAATAAACCATTGAAGATTCATATGATTGGTACCTCTATTAAGAAGCTGCCAAATTCTGTTGCTAATCTTATTGGACTTGTTTCGATAGATATGCAACATAGCAAGAAACTTGAATATCTACCAAGTAGCTTATTCAGGTTACCTAATGTTGTTGCTTTTGACTTTAGAGGATGTTCTAAACTTGGTGAATCTTTCAGAAGATTTCTACCTTATAGCACTTCAGAAGCCAGTGAACATTTAACTTCAAAAACAGTGAGTTTTTCATGTAATGATTTGTCAGATGAAGATATTCATCTAATTCTCATATGTTTTCCAAAATTAGAAGAATTGATTGTATCAGATAGTTCCGATTTGGTCTCTCTCCCAGCTTGGTGCAATAAGCTTCAAAAAATTCCCCAATGCACCAACTTGAGAATTCTAAATGTCGATGATTGTATGAGTCTTGCACACATTTCAGAGTTGCCACGTACTATTCAAAAAATAGATGCAAGAGGGTGCTACAACTTTTCTTCGGAGACATCAAACATGCTATGGGATCAGGTGAAAAAAGAGAGGCATGGATTAGAAATTGTGATGCCTAAAACCAATGTTCCAAAATGGTTTGATTATAGATGCAAAGAAGAGTTTCCGTGTTTATGGGTCCGTGGGAAGTTTCCAATTAATGTTGTTTTATCATTGGTGTTCCAAGGGGTTGAAAGCTCATATGTTGAACTTCATTTGGTTATCAACGGTCAATATGTCCCTTGCAAAGACCATTACAGGTTCCATATTAGACCGGATCATGTTTTAGTTTGTGATCTACGACTCTTATACAATGACGAGGAGTGGTTAAGCATTGATGCATTACTTCTTAAGCATGAATGGAATCAAGTGCAAATTTCATATGCAATCTCATTCCCGCAAGAAGAGCCAGTAGTAAGTGAATGGGGAGTTTTTGTGCACAAACAAGGAAGTGATAACTTGGAAGATCATGTTCAATTCATGTGTCCTGACCCAACAAGGTACTCAAACATATATAGTGGATTAACAAGGGGGTGGATAGTTTTACATTCATTTCAAGAACATGAAAACAATACTTTAGAAGATATTATAGACAAACTTTTAGATAAAGTGATACCATCTGTATATAAAGTGGTATCATCTCTAGATAGAATGAAGAAATTGCTATTTCATTGA 3153 0.3695 MTQKKQQRRKNGEDGREAVLQLRERWCLDELAKIMECTRRNNKQIAFPIFFHVDPSDVRHQRKSYGEAMVAHETRFGKESEKIKAWRAALSEVADLKGHHIHTGFEINHVKEIAEKVHAKIPPKSLLVGEYPVGLDQHIEDAKSLLDLKSNDDIVCMLGIYGLGGIGKTSLAKALYNKIAHQFQAACFLANVREKSNKISSSEDLQQTLLSEMFEQPDSKLGSTSKGIYEIKLKLGKKKVLLVLDDVDEMEQLENLAGGSDWFGPGSRIIITTRDKSLLIGTHQIEVKTYEMIGLNDQLSLQLFCRHAFGKSYPKTEYEDISSRAVRCAKGLPLALKVIGSNLRTRKSLKAWEDALKYYERIPRKEIQDVLKVSYDVLEPYAQSVFLDIACFFKGESVEYVKEILEEFGAASNIEELVNKSLLNVDNGYLSMHDVIQDMGREIVRQEAPDNPAKRSRLWFHQDVIDVLSSNDSGHDAIQGIMFDPPADRYPYWHNAFEKMHQLRILIVRCTTFSSKPKHLPNHLRILDWEKYPSKTLPPKFYPKNIIILNLRGSQLTIKKPFEQFSCLTVMNFSDNKSIKTMPDVSKVENLRELRLDRCVNLTTVHESIGFLKHLVHLSAVGCYKLKNFPQRMFLPSLEVIELYWCEKLEHFPDIVNEMNKPLKIHMIGTSIKKLPNSVANLIGLVSIDMQHSKKLEYLPSSLFRLPNVVAFDFRGCSKLGESFRRFLPYSTSEASEHLTSKTVSFSCNDLSDEDIHLILICFPKLEELIVSDSSDLVSLPAWCNKLQKIPQCTNLRILNVDDCMSLAHISELPRTIQKIDARGCYNFSSETSNMLWDQVKKERHGLEIVMPKTNVPKWFDYRCKEEFPCLWVRGKFPINVVLSLVFQGVESSYVELHLVINGQYVPCKDHYRFHIRPDHVLVCDLRLLYNDEEWLSIDALLLKHEWNQVQISYAISFPQEEPVVSEWGVFVHKQGSDNLEDHVQFMCPDPTRYSNIYSGLTRGWIVLHSFQEHENNTLEDIIDKLLDKVIPSVYKVVSSLDRMKKLLFH* 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3324 1050 Gene3D Ribonuclease Inhibitor 491 665 IPR032675 -
Tpr4g3324 1050 Gene3D Ribonuclease Inhibitor 666 841 IPR032675 -
Tpr4g3324 1050 Pfam NB-ARC domain 137 377 IPR002182 GO:0043531
Tpr4g3324 1050 Pfam TIR domain 23 117 IPR000157 GO:0007165
Tpr4g3324 1050 Gene3D - 118 287 IPR027417 -
Tpr4g3324 1050 SUPERFAMILY Toll/Interleukin receptor TIR domain 23 98 IPR035897 -
Tpr4g3324 1050 Gene3D - 21 117 IPR035897 -
Tpr4g3324 1050 SUPERFAMILY L domain-like 445 831 - -
Tpr4g3324 1050 Gene3D - 294 379 IPR042197 -
Tpr4g3324 1050 ProSiteProfiles TIR domain profile. 1 121 IPR000157 GO:0007165
Tpr4g3324 1050 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 125 389 IPR027417 -
Tpr4g3324 1050 PRINTS Disease resistance protein signature 157 172 - -
Tpr4g3324 1050 PRINTS Disease resistance protein signature 234 248 - -
Tpr4g3324 1050 PRINTS Disease resistance protein signature 329 343 - -
Tpr4g3324 1050 PRINTS Disease resistance protein signature 633 649 - -
Tpr4g3324 1050 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 26 972 - -
Tpr4g3324 1050 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 26 972 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3324 Tpr-Chr4 39192104 39201464 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3324 16 720 WRKY Transcription Factor Family AT4G12020 30.220 1.34e-80 287