Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3323 ATGGCAATTTCTGAAGAACAGTCACATGGTTTCGCCTATGATGTTTTCCTCAGTTTTAGAGGGGAAGACACACGGCACAATATTGTTGGATATCTTCTTGACGCATTTGAGAAGAGGGGAATCAAAGTTTTCTATGATGATACAAGTCTGAAAATAGGGGAAGAATTGTCAGCTGCATTTTGTAAAGCCATAGAAGAATCTAATATCTCAGTTATTGTTTTATCTGAGGATTATGCATCTTCTAGGTGGTGCCTTAATGAACTCGCAAAGATCATGGAATGTACGAAAAGGAACAAGAAACAAATTGCTCTTCCAATATTTTACCATGTTGATCCATCTGATGTACGAAACCAAAGAAACAGTTATGGCAAAGCCATGGTTGCTCATCAGACGAGGTTTGGAAAAGACTTGGGAAAAATAAAAGCATGGACAGCAGCATTGTCTGACGTCGCAAACTTGAAAGGTCACCATATCAACACTGGGTTCGAAATCAATCATGTTAAAGAGATTGCGGAAAAGGTCCACACTAATATAGCTCCAAAACCTTTAATTGATGGTGAGAATCCAGTTGGACTTGATCAACGCATAGAAGAAGTGAAGTCACTTCTAGACTTGAAACCAAATGATGACACTGTATGCTTGTTGGGCATAATTGGACTTGGCGGAATAGGGAAAACTGAACTTGCCAAAGCACTGTATAACAAGATTGTGCACAAATTTGAAGCTGCAAGTATACTTGAAAATGTTAGAGAGAAGTGGAACAGAATCAATGGCCCAGAATATCTACAAAAGACCCTTTTATTAGAGATGTTTGAGGAGCCAGAAACTGCGTGGGGAAGTACAAGTAAAGGAATCAAAGAAATAAAACACAAGCTTGGAAGGAAAAAGGTTCTTTTGGTACTTGACGATGTTGATGAGATGAAACAATTAGAAAACTTGGCAGGAGGAAGTGATTGGTTTGGTCCAGGTAGTAGGATCATTATAACTACAAGGGATAAAGGTTTATTCATGGGTACTCATCCAATTGAAGTTAAGACTTATGAAATGACTGAACTTAATGATCAACATTCTCTTGAGTTGTTTTGTCGAAATGCCTTTGCAAAAAGCAATCCTAAAGCACGATATGAAGTTGTGTCCTCCCGTGCCGTTGGTTATGCAAAAGGTCTTCCACTAGCTTTAAAAGTTATAGGATCCAATTTGGCTACTAGAAAAAGTTTAAAAGCTTGGGAGTCTGCATTGAAAGATTATGAAAGGATTCCGCATACAGGGATTCAAGATGTGCTTAAAGTAAGCTATGATGTGTTGGAGTCTAATGCTCAAAGTGTTTTTCTAGATATAGCATGCTTCTTCAAAGGGAAAAGAATAGAATATGTTGAAGAAATACTTGATGAATTCAGTGCAGCATCAAATATTGAAGAGCTTGTTAATAAATCTCTCTTGAATGTTGATAATGGATACTTGAATATGCATGACCTAATACAAGATATGGGCAGAGAGATTGTTAGGAAAGAGGCACCAAATAATCCTACAAAACGTAGTAGATTATGGCATCAACAAGATGTCATCGATGTATTATCGGCCAATGATTATGGAAGTGATGCAATTCAAGGGATAATGCTTGATCCTCCCCAACGTATAACAGAAGTAGATTGGAATGATACTGCTTTTGAGAAGATGAACCGTCTTAGAATTCTTATTGTTAGAAATACAATCTTTTCATCAGAGCCTAAACATCTTCCAAATCATTTAAGGCTACTTGACTGGGATGTATACCCTTCAAAGACTTTCCCACCAAAATTTTACCCGAGGGATATCATCATCTTAAAATTGCCTAATAGTCAACTTACAATTGAAGGGCCATTTAAGAAATTTTCATATCTTATTGTCATGGATTTCTCATATAATCAATCTATCACAACAATGCCTGATGTGTCCAAAGTTGAAAATTTGAGAGAATTGCGACTTGATAATTGTCGAAACTTAACTATGGTTCATGAATCCATTGGATTTATCAAACATCTTGTCCACTTAAGCGCTTCGGGATGTACCAAACTTAAAAACTTTTTGCAAAGAATGTTTTTACCATCTCTAGAAGTCCTTGACCTTAATTATTGTGTAAATCTTACTCACTTCCCAGATATAGTGAACGAGATGAATAAACCATTGAAGATTCATATGATGGGTACCTCTATTAAGAAGTTGCCAAATTCTGTTGGTAATCTTATTGGACTTGTTTCAATAGACATGGAACATAGTGAGAAACTCGAATATCTACCAAGTAGCTTATTCAGGTTACCAAATGTTCTTGCTTTTGACTTTGGAAGTTGTCCTAAACTTGCTGGATCTTTCAGAAAATTTCTACCTGATAGCCCTTCAGAAGCCAATGAACGTTCAACATTAAAAACAATGCATTGTGAAGAAAGTGGTTTGTCAGATGAAGATATTCAGGCAATTCTCATATGTTTTCCAAAATTGGAAGAATTGATTGCATCAAGTAACAATTTTATCTCTCTCCCATCGTGCATTAAAGTTTTTGATCACTTGACAGATCTTGATGTTAGAATGTGCAAAAAGCTTCAAACAATTCCCGAATGCACCAACTTGAGAATTTTGAATGTCGATGATTGTACGAGTCTTACAAACATTTCAACATTGCCACGCATTGTTCAAAAAATAGATGCAAGAAAATGCTTCAACTTTTCTTCGGAGACATCAGACCTGCTATGGGATCAGGTGAAAAAAGAGAGGCATCTAATAGAAATTGTGATGCCTGGAATCAAGGTTCCAAAATGGTTCAACTATATATGTAAAGACGGAATTCCATGTTTATGGGTTCGTGGGAAGTTTCCCAGTGTTTCTTTAGCATTGGTGTTCCAATATGCGGATGGGAAGGAAAGAATAAATCATGATCTTGTTCAACTTCAATTGGTTATCAACGGTCAATCTGTGACTCACAAAGGCTGTTACAACTTCATAATTGAACCGCATCATGTTTTAGTTTGTGATCTACGAGTCTTATTCAATGACGAGGAGTGGCTAAATCGTGATGCATTACTGCTTAAGCATGAATGGAATCAACTGCAAATTTCATATGAAGCCAAGAACAGCATGGTGACACTAAGTGAATGGGGAGTTTTTGTGTACAAACAAGGAGCTGTTAACTTGAAAAAACATGTTCAATTCACATGTCCTATGAAAAGTGATGAAGAACAGTCGGATGGTTTCATCTATGATGTTTTCCTCAGTTTTAGAGGGGAAGACACGCAGGAGAATATTTTTGGACTTCTTGAAGCATTTGAGAACAGGGGAATCAATGTTTTCTATGATGATAAAAAACTTGAATTAGGGGAAGACATTTCACCTGCATTTTGTAAAGCCATAGAAGAGTCTAATATCTTAGTTATTGTTTTATCTGAGGATTATGCATCTTCTACATGGTGCCTTGATGAACTTGTGAAGATCATGGAATGTACGAAGAGAAACAATAAACAAATTGCTCTTCCAATTTTTTACCTTGTTGATCCATCAGATGTACGACATCAAAGAAACAAGTATGGAGAAGCCATGGTTTCTCATCAGAAGAGGTTTGGAAAAGACGCAGAAAAAATTAAAGCATGGACAGCAGCATTGTCTGACGTGGCAAACTTGAAAGGTCACCATATCGACACTGGAGGAAATTTATTTGCATGTTATAAAGGAAACTTCAAGGTTTGTGATACACTCAACATTGACAAAATGGATATTGTGACCAAATTAGATAACTTTGATGACAAGAAAGAAGATGAAGTTGTGCTTCCTGGATTTAGATTTCATCCAACAGATGAAGAGCTTGTTGGATTTTATCTACGGCGAAAAGTGGATAAGAAGTCTCTTCGAATCGAACTCATCAAACAAATTGATATCTACAAATATGATCCATGGGATTTACCAACTAGTAGTATGGGAGAGAAAGAATGTTATTTCTTTTGTCTAAGAGGAAGAAAATACAGAAACAGCATAAGGCCTAATAGAGTAACAGGATCTGGATTTTGGAAAGCCACTGGAATTGATAAACCTATATACTCATCAAGTGTTAAAGAATCATCATCACATGATGAATGTATTGGACTTAAGAAATCATTGGTTTACTATCGAGGAAGTGCTGGAAAAGGTACCAAAACTGATTGGATGATGCATGAATTTCGTCTTCCACCTAAAGGAAAAACTAGCAATAATCAGCTGCATAATCTTAGCAATGATGTTCAAGAAGCTGAAGTGTGGACACTGTGCAGAATATTCAAAAGAATCCCATCATACAAAAAATACACACCAAATTTGAAAAAAGACTCAGAAGAAACATTAGCATTCACAACTAACTCTTCAAGTTCCAAAACATGCAGCTTAGAATCTGATAACACCAAACCATACTTGAATTTCACAAACTCACCACTTGTTGATGAAACCAAAACATTTATTAATGGACATGTTGACCAAAGGATTAACCCCTCATTTATAAGTCATCAGTTAGGAAATGTAGCTCATCAGGCTCCAACAACATTGTCTCAGTCAAGTTTTTGGAATGATCAGAATGTTGTTGATGAAGCATTTGCAAATGAGAATTGGGATGATCTTAGATCTGTTGTTCAGTTTACCTTTGATCCATCAAAGGTTTATGATTGTAAAGACTTTAATTAG 4674 0.3626 MAISEEQSHGFAYDVFLSFRGEDTRHNIVGYLLDAFEKRGIKVFYDDTSLKIGEELSAAFCKAIEESNISVIVLSEDYASSRWCLNELAKIMECTKRNKKQIALPIFYHVDPSDVRNQRNSYGKAMVAHQTRFGKDLGKIKAWTAALSDVANLKGHHINTGFEINHVKEIAEKVHTNIAPKPLIDGENPVGLDQRIEEVKSLLDLKPNDDTVCLLGIIGLGGIGKTELAKALYNKIVHKFEAASILENVREKWNRINGPEYLQKTLLLEMFEEPETAWGSTSKGIKEIKHKLGRKKVLLVLDDVDEMKQLENLAGGSDWFGPGSRIIITTRDKGLFMGTHPIEVKTYEMTELNDQHSLELFCRNAFAKSNPKARYEVVSSRAVGYAKGLPLALKVIGSNLATRKSLKAWESALKDYERIPHTGIQDVLKVSYDVLESNAQSVFLDIACFFKGKRIEYVEEILDEFSAASNIEELVNKSLLNVDNGYLNMHDLIQDMGREIVRKEAPNNPTKRSRLWHQQDVIDVLSANDYGSDAIQGIMLDPPQRITEVDWNDTAFEKMNRLRILIVRNTIFSSEPKHLPNHLRLLDWDVYPSKTFPPKFYPRDIIILKLPNSQLTIEGPFKKFSYLIVMDFSYNQSITTMPDVSKVENLRELRLDNCRNLTMVHESIGFIKHLVHLSASGCTKLKNFLQRMFLPSLEVLDLNYCVNLTHFPDIVNEMNKPLKIHMMGTSIKKLPNSVGNLIGLVSIDMEHSEKLEYLPSSLFRLPNVLAFDFGSCPKLAGSFRKFLPDSPSEANERSTLKTMHCEESGLSDEDIQAILICFPKLEELIASSNNFISLPSCIKVFDHLTDLDVRMCKKLQTIPECTNLRILNVDDCTSLTNISTLPRIVQKIDARKCFNFSSETSDLLWDQVKKERHLIEIVMPGIKVPKWFNYICKDGIPCLWVRGKFPSVSLALVFQYADGKERINHDLVQLQLVINGQSVTHKGCYNFIIEPHHVLVCDLRVLFNDEEWLNRDALLLKHEWNQLQISYEAKNSMVTLSEWGVFVYKQGAVNLKKHVQFTCPMKSDEEQSDGFIYDVFLSFRGEDTQENIFGLLEAFENRGINVFYDDKKLELGEDISPAFCKAIEESNILVIVLSEDYASSTWCLDELVKIMECTKRNNKQIALPIFYLVDPSDVRHQRNKYGEAMVSHQKRFGKDAEKIKAWTAALSDVANLKGHHIDTGGNLFACYKGNFKVCDTLNIDKMDIVTKLDNFDDKKEDEVVLPGFRFHPTDEELVGFYLRRKVDKKSLRIELIKQIDIYKYDPWDLPTSSMGEKECYFFCLRGRKYRNSIRPNRVTGSGFWKATGIDKPIYSSSVKESSSHDECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPKGKTSNNQLHNLSNDVQEAEVWTLCRIFKRIPSYKKYTPNLKKDSEETLAFTTNSSSSKTCSLESDNTKPYLNFTNSPLVDETKTFINGHVDQRINPSFISHQLGNVAHQAPTTLSQSSFWNDQNVVDEAFANENWDDLRSVVQFTFDPSKVYDCKDFN* 1558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3323 1557 Gene3D NAC domain 1273 1431 IPR036093 GO:0003677|GO:0006355
Tpr4g3323 1557 Pfam TIR domain 1077 1214 IPR000157 GO:0007165
Tpr4g3323 1557 Pfam TIR domain 12 174 IPR000157 GO:0007165
Tpr4g3323 1557 Gene3D - 177 341 IPR027417 -
Tpr4g3323 1557 ProSiteProfiles NAC domain profile. 1264 1428 IPR003441 GO:0003677|GO:0006355
Tpr4g3323 1557 SMART till_3 1076 1216 IPR000157 GO:0007165
Tpr4g3323 1557 SMART till_3 12 153 IPR000157 GO:0007165
Tpr4g3323 1557 Pfam NB-ARC domain 194 435 IPR002182 GO:0043531
Tpr4g3323 1557 Gene3D - 12 176 IPR035897 -
Tpr4g3323 1557 Gene3D - 1076 1233 IPR035897 -
Tpr4g3323 1557 ProSiteProfiles TIR domain profile. 11 178 IPR000157 GO:0007165
Tpr4g3323 1557 SUPERFAMILY Toll/Interleukin receptor TIR domain 1067 1218 IPR035897 -
Tpr4g3323 1557 PRINTS Disease resistance protein signature 214 229 - -
Tpr4g3323 1557 PRINTS Disease resistance protein signature 291 305 - -
Tpr4g3323 1557 PRINTS Disease resistance protein signature 386 400 - -
Tpr4g3323 1557 PRINTS Disease resistance protein signature 692 708 - -
Tpr4g3323 1557 SUPERFAMILY NAC domain 1262 1427 IPR036093 GO:0003677|GO:0006355
Tpr4g3323 1557 Gene3D - 351 436 IPR042197 -
Tpr4g3323 1557 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 32 1045 - -
Tpr4g3323 1557 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1097 1210 - -
Tpr4g3323 1557 Pfam No apical meristem (NAM) protein 1266 1396 IPR003441 GO:0003677|GO:0006355
Tpr4g3323 1557 CDD AAA 225 332 - -
Tpr4g3323 1557 Gene3D Ribonuclease Inhibitor 544 723 IPR032675 -
Tpr4g3323 1557 Gene3D Ribonuclease Inhibitor 724 917 IPR032675 -
Tpr4g3323 1557 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 32 1045 IPR044974 GO:0006952
Tpr4g3323 1557 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1097 1210 IPR044974 GO:0006952
Tpr4g3323 1557 ProSiteProfiles TIR domain profile. 1075 1214 IPR000157 GO:0007165
Tpr4g3323 1557 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 155 IPR035897 -
Tpr4g3323 1557 SUPERFAMILY L domain-like 489 884 - -
Tpr4g3323 1557 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 446 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3323 Tpr-Chr4 39181121 39234212 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3323 13 779 WRKY Transcription Factor Family AT4G12020 30.038 1.70e-83 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr4g3323 NB-ARC 5e-26 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3323 - - mtr:MTR_5g090940 1424.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3323 4 39181121 39234212 Tpr4g3323 4 39181121 39234212 ECH