Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3314 ATGGAAAACTATGATGAGTCTGCTGATGTTGATGTTGATGTTGATTCCATTCATTCAAGTGAACGTGATTCATGGGACGAGGAGTTGGACGATGAAGAAAGTTATTCGATATCTAATATGAATCAAAGTTCAGTGGATGGCGATCATTCAGCTGATAATGGCAATGATGATGGAGATGCAGTTGGATGCAATAGCCAGATAAGGTTTGATACCATAACTGCTGAAGAAATTCGTTCTATGGAATTTGCCACTCTTAATGAAGCTTATGACTTTTATTACCGTTATGGTAAGTATAATGGTTTTGCTGTTAGGAAAGGTGATAGTAGGGTAAGAGGTAGTGAAGGTAATAAAGTAATAAAAATGAAGCAGTTTGTATGCAACAAACACGGTGTAAGAGAGAAGAGACACTTAGTTAGGGTAGATAGGAAATTAGAACATAGACGGTTGACCCGCACTAAATGTGGAGCCAGGCTTCGTGTGAAATACAAAGCTGAAAAAGATAGATATGTAGTTTCAGCTTTTGAAGAGACTCATAACCATGAATTAACCCCAGCTAGGTTTGTGCACTTACACCCCGTATATCGTAAAATTTCTGAAGTAGATAAGGCTCAGGTGGATAGTCTTCAGAAACGTGGCATTAGAACATGTCATATAATGGGGTACATGGTTGCACAGAAGGGTGGATATGCTGATGTTGGTTTTACAAAGAAAGATTTGTACAACTATTTTGATAAAAAAATGCGTGCTGTTATTAAAGATGGTGATGTTGCCGCAGCTTTAAACTACCTGAATATGAAGTCGTCTAGTGATCCCATGCTTTATGCTGAGTATGCTGTAGACAACGTTAATGGAAGAATGAAGACTCTTTTTTGGGCTGATGGGATTAGTAGGACCGACTATTTTTGTTTTGGTGATGTGCTTGCATTTGACACGACTTACAGGAAGAACAAGTACAACTATCCGTTGGTTGTATTTTCAGGGTGTAACCACCACTCTCAAACAGTAATTTTTGGTGCTGCATTGGTGTCAGATGAAACGACGGAGACGTATAAGTGGGTGTTGAGGTGTTTCCTAGAATGCATGGAAGGTAAACAACCAAAAGCGGTGGTAACAGATGGGGATGGGGCAATGAGAGAGGCCATAAAACAGATATTTCCCGATGCTAACCATAGGTTATGTGCTTGGCATTTGAATAAGAATGCAAGTGAGAATGTGAAGAACGGAAATAATTTTTTGGACGGTTTTTCAAAGGCCATGTACTCAAATTTTACAATAGATGAATTTGAAGAGTATTGGTCACAAATGATTAAAGAAAATGGAGTGCAAGGACATCCTTGGGTAGTCAAAACGTACGAGAATAGGTCACTGTGGGCTACTGCATATCTACGAGATAATTTTTTTGGACGTATAAGAACTACGTCGCAGTGCGAAGCTGTTAATGCAATAATTAAGAGTTATGTCAGGAAGCAAGGATGCATTTTTGAATTTATGAACAACTTTGATCAGGCTTTGAGAGATTATAGAAATAATGAGTTGGTTGCTGATTTTAAATCATCGTCTACAGATCCTGTGTTGTCGACGCAACTGCATGTGATTGAGAGTCATGCTGGTAAAATATATACGGCGGAGCTTTTCAAAGAAGTTAGACATGAAATATTGAAAGCCGGTGAATTGATAGTTAGGGAGAAAAGCGAAGTCGGGGAGGTTTGA 1710 0.3883 MENYDESADVDVDVDSIHSSERDSWDEELDDEESYSISNMNQSSVDGDHSADNGNDDGDAVGCNSQIRFDTITAEEIRSMEFATLNEAYDFYYRYGKYNGFAVRKGDSRVRGSEGNKVIKMKQFVCNKHGVREKRHLVRVDRKLEHRRLTRTKCGARLRVKYKAEKDRYVVSAFEETHNHELTPARFVHLHPVYRKISEVDKAQVDSLQKRGIRTCHIMGYMVAQKGGYADVGFTKKDLYNYFDKKMRAVIKDGDVAAALNYLNMKSSSDPMLYAEYAVDNVNGRMKTLFWADGISRTDYFCFGDVLAFDTTYRKNKYNYPLVVFSGCNHHSQTVIFGAALVSDETTETYKWVLRCFLECMEGKQPKAVVTDGDGAMREAIKQIFPDANHRLCAWHLNKNASENVKNGNNFLDGFSKAMYSNFTIDEFEEYWSQMIKENGVQGHPWVVKTYENRSLWATAYLRDNFFGRIRTTSQCEAVNAIIKSYVRKQGCIFEFMNNFDQALRDYRNNELVADFKSSSTDPVLSTQLHVIESHAGKIYTAELFKEVRHEILKAGELIVREKSEVGEV* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3314 569 MobiDBLite consensus disorder prediction 1 48 - -
Tpr4g3314 569 Pfam FAR1 DNA-binding domain 90 183 IPR004330 -
Tpr4g3314 569 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 76 557 IPR031052 GO:0006355
Tpr4g3314 569 Pfam MULE transposase domain 306 400 IPR018289 -
Tpr4g3314 569 PANTHER OS02G0262500 PROTEIN 76 557 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3314 Tpr-Chr4 39081062 39082863 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr4g3314 MULE 2e-30 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3314 - - ccaj:109792835 669.077