Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3303 ATGGCTAATGAGAATAATCATAATCCTTTCTATCAACACAACCACCATGATGATGAACTCAATAACTCAAACTTTTCATTCCCACAAAACTTTCAAGGATTTGATCCTTCTCCTCATAGCACAAATTTCACCGACTATTTACATGGTTCCATGGATTATAACACTCTCTCAAAAGCCTTTGATTTGTCTTGTTCATCATCTGAAATGAATATTTCTTCCATTGATGATAACAATACAAAGAAATCTAGTGTAGGAATTAGTGAGACACTAAATTCCTCAGAATCATCATCATCTAATGAAGCTGTGATACAAGAAGATTCAACCAAAATTAACAAGAAAGATAAGCAACCAAAATTAGGGTGTGAAGATGGAGATGATGAAAAGTCTAAGAAAGAGAAAGAGAACAAGACTAAAAAGAAAGAGAAAAAGCCAAAAGAACCAAGATTTGCTTTCTTGACTAAAAGTGAGATTGATCATCTTGAAGATGGATATAGATGGAGAAAATATGGACAGAAAGCAGTCAAGAATAGTCCATACCCAAGGAGCTATTATAGATGCACAAGTCAAAAGTGCATTGTGAAGAAAAGAGTGGAGAGATCATACCAAGATCCAACAATTGTGATGACAACATATGAAGGACAACACAATCATCATTGTCCAGCAACACTAAGAGGTAATGCTTCCTCCATGTTGTTTTCATCACCATCACTTTTTGCTCCAACTTCAATGGGATTGGAACAAAGATTGCACCAAGATTTTCTTGCTCAGTTTCTTCCAAGTTACACCCAAAATGATATTCAACAACAAATGTTCCACCAAAATCTTCCACAAATATTACCTCATCATCAACAACAACAGCAGCAGCAACAGCAACAGTTTCAACTTCATCGTGACTATGGTTTGTTGCAAGATCTACTACCATCATCATTTCCAAGAAAACAAGAGCCATGA 951 0.3554 MANENNHNPFYQHNHHDDELNNSNFSFPQNFQGFDPSPHSTNFTDYLHGSMDYNTLSKAFDLSCSSSEMNISSIDDNNTKKSSVGISETLNSSESSSSNEAVIQEDSTKINKKDKQPKLGCEDGDDEKSKKEKENKTKKKEKKPKEPRFAFLTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCIVKKRVERSYQDPTIVMTTYEGQHNHHCPATLRGNASSMLFSSPSLFAPTSMGLEQRLHQDFLAQFLPSYTQNDIQQQMFHQNLPQILPHHQQQQQQQQQQFQLHRDYGLLQDLLPSSFPRKQEP* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3303 316 MobiDBLite consensus disorder prediction 106 149 - -
Tpr4g3303 316 MobiDBLite consensus disorder prediction 85 105 - -
Tpr4g3303 316 Gene3D WRKY domain 145 221 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr4g3303 316 SMART WRKY_cls 160 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr4g3303 316 MobiDBLite consensus disorder prediction 85 149 - -
Tpr4g3303 316 SUPERFAMILY WRKY DNA-binding domain 153 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr4g3303 316 Pfam WRKY DNA -binding domain 161 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr4g3303 316 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 20 309 IPR044810 GO:0003700
Tpr4g3303 316 ProSiteProfiles WRKY domain profile. 155 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr4g3303 316 PANTHER WRKY TRANSCRIPTION FACTOR 71-RELATED 20 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3303 Tpr-Chr4 38990961 38994096 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3303 33 316 WRKY Transcription Factor Family AT4G18170 43.599 1.07e-56 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr4g3303 WRKY 1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3303 - - aprc:113847247 352.443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3303 4 38990961 38994096 Tpr4g3303 4 38990961 38994096 ECH