Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3293 ATGTTTGGTGAAATGGAACACAAGCAAGAACAAGACAATGGTAACCAGAATAATAATATGTCTGGTAATGGTATTGATGTTACTCTAATATCTCCTAAAGTTCCGAAATCAGTTTCGCCAGTTTCTTCTGCAGCTGAGGGGGAGACTTTAAAGCGGCCTCGCGGTCGACCGGCTGGATCGAAAAACAAGCCTAAGCCACCAATCATTGTCACTAGAGATAGTGCTACTGCACTTAAAGCTCATGCTATGGAAGTGAGCTCTGGCTGTGATGTGAACGAAAGTTTGTTGAACTTTGCAAGGAGAAAGCAACGTGGTCTTTGTATACTTAATGGCACTGGTTGTGTAACAAATGTAACGCTGCGCCAACCGGCTTCATCTGGTGCAATTGTAACCCTTCATGGTCGATTTGAGATTCTCTCGTTGTTGGGGTCGATTCTTCCCCCACCGGCACCACCAGGAATTACTGGTCTAACAATATATTTAGCAGGTCCTCAAGGACAAGTTGTTGGAGGTGCTGTAGTTGGTGCTTTGATTGCTTCAGGACCTGTTGTGATCATGGCTGCATCATTCATGCACGCTACTTTTGATCGTCTTCCACTTGAAGACGATGAACTTGCTGCTGCTATGCAGAATCAGCATTACCAAAATGGACGCGCGCAACATCATCTTGATATCTCTGACTTATATGCAATGCCACAGAACCTCCTCATGAATGGTGCAATGCCTCCTGAGGTATACTCTTGGGCACCAGGGAGAAACTTGTCAAAAACCTGA 774 0.4509 MFGEMEHKQEQDNGNQNNNMSGNGIDVTLISPKVPKSVSPVSSAAEGETLKRPRGRPAGSKNKPKPPIIVTRDSATALKAHAMEVSSGCDVNESLLNFARRKQRGLCILNGTGCVTNVTLRQPASSGAIVTLHGRFEILSLLGSILPPPAPPGITGLTIYLAGPQGQVVGGAVVGALIASGPVVIMAASFMHATFDRLPLEDDELAAAMQNQHYQNGRAQHHLDISDLYAMPQNLLMNGAMPPEVYSWAPGRNLSKT* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3293 257 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 16 10 256 - -
Tpr4g3293 257 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 10 256 IPR014476 GO:0003680
Tpr4g3293 257 ProSiteProfiles PPC domain profile profile. 75 213 IPR005175 -
Tpr4g3293 257 Pfam Plants and Prokaryotes Conserved (PCC) domain 80 190 IPR005175 -
Tpr4g3293 257 CDD DUF296 81 164 IPR005175 -
Tpr4g3293 257 MobiDBLite consensus disorder prediction 1 69 - -
Tpr4g3293 257 Gene3D - 77 222 - -
Tpr4g3293 257 PIRSF ESCAROLA 2 252 IPR014476 GO:0003680
Tpr4g3293 257 SUPERFAMILY AF0104/ALDC/Ptd012-like 76 207 - -
Tpr4g3293 257 MobiDBLite consensus disorder prediction 12 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3293 Tpr-Chr4 38902788 38903561 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3293 5 256 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 67.323 1.84e-106 307
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3293 - - gmx:100804941 394.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3293 4 38902788 38903561 Tpr4g3293 4 38902788 38903561 ECH