Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3287 ATGCATAAAGTAAAGAAATCACTGGAGATGGACTTTTTCTCGGACTATGGCGATGCCAACCGGTATAAAATTCAAGAAGTAATTGGGAAAGGTAGTTATGGTGTTGTTTGTTCAGCTGTTGATACTCATACTGGTGAAAAAGTTGCAATTAAAAAGGTTCATGGTATCTTTGAGCATATATCCGACGCTGCACGTATTCTTCGTGAGATAAAGTTGCTCAGACTTCTTAGACATCCAGATATTGTTGAAATTAAGCACATTATGTTGCCTCCTTCAAGCAGAGAATTCAAAGATATTTATGTTGTTTTTGAGCTTTTGGAATCTGATCTGCATCAAGTCATTAAAGCCAATGCCGACTTAACAAAAGAGCACTATCAGTTTTTTCTTTATCAGTTACTTCGAGCATTGAAGTATATTCACACTGCAAATGTCTATCATCGAGACTTGAAGCCAAAGAATATACTGGCCAATGCAAACTGTAAACTTAAAATCTGTGATTTTGGGTTAGCTAGAGTTGCTTTCAGTGACACTCCAACAACTGTATTTTGGACGGACTATGTTGCTACAAGGTGGTATAGAGCACCCGAGCTCTGTGGATCATTTTACTCAAAGTATACGCCGGCAATTGATATTTGGAGTATAGGATGCATCTTTGCTGAAGTGTTAATAGGAAAACCACTTTTTCCCGGAAAAAGTGTCGTACATCAGTTGGATCTGATCACAGATCTGCTCGGGACCCCCTCAATGGATTCTATATGTCGGGTACGCAATGATAAAGCAAGGAGATACCTAACTAGTATGAGGAAAAAGCAGCCTATACCATTTGCACAAAAATTTCCTAATGCAGATCCTTTATCACTACGGCTACTGGAGAGGTTGCTCGCCTTTGATCCAAAAGACCGGCCTACTGCTGAAGAGGCATTAGCTGATCCTTACTTCAAGGGACTTGCGAAAATTGAAAGGGAACCATCTTGCGAGCCCATTACACAAATGGAGTTTGAATTTGAAAAGAGAAGAGTAACAAAGGGAGAAATCCGAGACTTGATTTTCCATGAGATTCTAGAGTACCATCCTCAACTAAATGGAACAGAGAGAACTAATTTTCTTTATCCAAGTGCTGTTGATCAATTTGACAAGCAGTTCACTCATCTTGAGGAAACTGGTGGTAAAAGTGACCCTGTTGTGCCACTTGAAAGAAAACATGCATCGCTTCCCAGATCAACAATCGTACATTCAAATATGACACCCCAAAAAGAACAGTCGAATATTGCTTCCAGCAAAAACCGGCAAACAACTGAGGAATATAATACTAAATATATAGAATCCAGCGGCATTCGAGGACTGCAAATAATTCCACTTGAAACACCTGGTAAAGTTGTTAGGCCGGTTGTTAAATATGAGCATGGAAGTATTGTCAATGATTCGTATGATTCCAGAACATCAATGAGAGGCAAAACATACCCAACGGTTTTGAATCAAGGCCGAAGTAGCATCAAGTTTAACCATAAGTATTGA 1515 0.3934 MHKVKKSLEMDFFSDYGDANRYKIQEVIGKGSYGVVCSAVDTHTGEKVAIKKVHGIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSSREFKDIYVVFELLESDLHQVIKANADLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTVFWTDYVATRWYRAPELCGSFYSKYTPAIDIWSIGCIFAEVLIGKPLFPGKSVVHQLDLITDLLGTPSMDSICRVRNDKARRYLTSMRKKQPIPFAQKFPNADPLSLRLLERLLAFDPKDRPTAEEALADPYFKGLAKIEREPSCEPITQMEFEFEKRRVTKGEIRDLIFHEILEYHPQLNGTERTNFLYPSAVDQFDKQFTHLEETGGKSDPVVPLERKHASLPRSTIVHSNMTPQKEQSNIASSKNRQTTEEYNTKYIESSGIRGLQIIPLETPGKVVRPVVKYEHGSIVNDSYDSRTSMRGKTYPTVLNQGRSSIKFNHKY* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3287 504 MobiDBLite consensus disorder prediction 412 432 - -
Tpr4g3287 504 CDD STKc_TDY_MAPK 21 358 - -
Tpr4g3287 504 ProSitePatterns MAP kinase signature. 57 160 IPR003527 GO:0004707|GO:0005524|GO:0006468
Tpr4g3287 504 Gene3D Transferase(Phosphotransferase) domain 1 108 336 - -
Tpr4g3287 504 SMART serkin_6 22 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g3287 504 ProSitePatterns Protein kinases ATP-binding region signature. 28 52 IPR017441 GO:0005524
Tpr4g3287 504 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 7 463 - -
Tpr4g3287 504 SUPERFAMILY Protein kinase-like (PK-like) 18 317 IPR011009 -
Tpr4g3287 504 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 7 463 - -
Tpr4g3287 504 Pfam Protein kinase domain 22 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g3287 504 ProSiteProfiles Protein kinase domain profile. 22 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g3287 504 Gene3D Phosphorylase Kinase; domain 1 37 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3287 Tpr-Chr4 38853254 38859900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3287 2 428 MAP Kinase Gene Family AT2G42880 83.565 0.0 749
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Tpr4g3287 Pkinase 7.8e-66 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g4240 3 47193596 47199916 Tpr4g3287 4 38853254 38859900 PCT