Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3286 ATGGAAGAAGGAGACATGGAAACTGAGGGAAACATAACCATACCAGCATTTCTCACTCAAAAGATGAATACTACTAGTACTACTACTACTGAAAAGTCTCTGCATGTCTTCAAGCGAATCCGAAGACGGTGCAGAGACAATGATAGTAAAGAGATGATGTTGATAAAGGAAGATGCTAAGGAGAAAGAAGAAGATGAAGAAGGTGGTGATGATGATAGAGAAGAGATAGAGAGAAAGATTCATGCATTACAAAGGATAGTACCAAATGGTGAGTCATTTGGTGTGGACAAACTTTTTGATGAAACTGCTGGCTATATAATTGCTTTACAATATCAAGTCAAAGCTTTGAAAGCTCTTACTGGTTTCTTTGAAAAGTTGGAGAAAGACAAGACTAAACTTGGAGGTTGA 408 0.375 MEEGDMETEGNITIPAFLTQKMNTTSTTTTEKSLHVFKRIRRRCRDNDSKEMMLIKEDAKEKEEDEEGGDDDREEIERKIHALQRIVPNGESFGVDKLFDETAGYIIALQYQVKALKALTGFFEKLEKDKTKLGG* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3286 135 MobiDBLite consensus disorder prediction 1 30 - -
Tpr4g3286 135 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 28 133 IPR044660 GO:0006355
Tpr4g3286 135 MobiDBLite consensus disorder prediction 50 76 - -
Tpr4g3286 135 CDD bHLH_AtIBH1_like 76 120 IPR044549 GO:0006355
Tpr4g3286 135 PANTHER TRANSCRIPTION FACTOR PAR1 28 133 - -
Tpr4g3286 135 MobiDBLite consensus disorder prediction 13 30 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3286 33 123 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 30.435 3.95e-07 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3286 - - mtr:MTR_5g091690 167.933