Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3282 ATGAAACTACCAATGATATTACTCGTGATACCACCGTTCAAGGCAACAACTCTGAAGAAACAGATCCACTATTGGATGAAAAATACCACAAGTTCAACGGTTACAATCGTAGATGCTTTATACTTCGGTGCAGTGACTTTATCCACCGTTGGATACGGAGACATCATTCCAGATACCGCAGTTGCAAAAATTATCACAAGTGTTTTCATTTTGTTGGGTTTTGTGGTGAGTTATCGACTTAATAATGTGTTTGAACACATTTGTGATACAATAGAGGCATCGTTAGTGAGAAACAAGGATAGCTGGAATCCAACTCTAAAGGCGTGGATGTTTGATGACACAGAAATTAGTAAGAGAGCTAAGTTTTGTATTTGTGTGGTTGTTATCATCTTGTTAATTGCTCTTGGAACAATCACAACACACCGTATCGAGAAGCTACATTGGATTGATAGTTTTTATTTTTCCGTTACTTCGGTTACGACGGTTGGTTACGGCGAATTTTCATTCAAAACAACGGGCGGGAAATGGTGGGCAATCATCTGGATTTTGATAGGTACAACTACGGCTGCAAGTTGTTTAACGTACCTCAGTGAATATTACTTGCCAAGGAGAAGCGGTGATATGACGCAGTGGATTCTGAAGAAGAAAATAACGGCGTCTGATTTAGCGGCAACATGA 678 0.3968 MKLPMILLVIPPFKATTLKKQIHYWMKNTTSSTVTIVDALYFGAVTLSTVGYGDIIPDTAVAKIITSVFILLGFVVSYRLNNVFEHICDTIEASLVRNKDSWNPTLKAWMFDDTEISKRAKFCICVVVIILLIALGTITTHRIEKLHWIDSFYFSVTSVTTVGYGEFSFKTTGGKWWAIIWILIGTTTAASCLTYLSEYYLPRRSGDMTQWILKKKITASDLAAT* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3282 225 PRINTS Two pore domain K+ channel signature 45 73 IPR003280 GO:0005267|GO:0016020|GO:0071805
Tpr4g3282 225 PRINTS Two pore domain K+ channel signature 160 169 IPR003280 GO:0005267|GO:0016020|GO:0071805
Tpr4g3282 225 Pfam Ion channel 22 79 IPR013099 -
Tpr4g3282 225 Pfam Ion channel 128 199 IPR013099 -
Tpr4g3282 225 PANTHER OS01G0696100 PROTEIN 30 223 - -
Tpr4g3282 225 Gene3D - 6 94 - -
Tpr4g3282 225 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 30 223 IPR003280 GO:0005267|GO:0016020|GO:0071805
Tpr4g3282 225 SUPERFAMILY Voltage-gated potassium channels 106 210 - -
Tpr4g3282 225 Gene3D - 104 219 - -
Tpr4g3282 225 SUPERFAMILY Voltage-gated potassium channels 31 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3282 Tpr-Chr4 38820096 38820889 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3282 3 203 Ion Channels AT1G02510 38.049 1.48e-35 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3282 K05389 - gmx:100789639 172.17