Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3281 ATGATTATAAACATAATCTATTTTCTATCATGTGCTCTGTTTCCCCTGTTTGTTCTGTTCTCATTCAATTTCTTGAGGCATAAGCAACAAAGTAACAAACACAAAACAAAGCTTCCACCAGGTGATATGGGGTTTCCATTCATAGGAGAGACAATGGAATTCTTCAATGCTCAAAGGAGAAACAAATTGTATGAAGAATTTGTTCATCCTCGAATCACGAAACACGGAAAAATCTTCAAAACAAGGATCATAGGTTCACCAACTGTGATTGTAAATGGAGCTGAAGCAAATAAATTTCTTCTATCCAATGAATTCAAGTTGGTAAAAAGTTCTTGGCCTTCTTCCTCAGTTCATCTCATGGGAAAAGACTCTATCATGGAGAAAGATGGCGAAAGACACCGTTTTCTTCGCGGTGTTATCGGCACTAGTCTTGGCTATGCAGGACTTGAAACATTAGTTCCAAAACTATGCAACTTTGTAAAATTATATTTATCTCAAAACTGGCATGGCCAAGAAGAGATTAGTCTCTATCGTTCGACGAAAGTTCTTACATTTAGCATAGTTTTCGAGTGCTTGTTAGGTATCAAAGTTGAACCAGGTATGATAGATACATTTGAAAGAGTTTTGGAAGGAGTTTTCTCTCCAGCAATTAAGTTTCCAGGTTCTAAATTTTCGAGAGCAATGAAAGCTAGAAAGGAGATTGAAAAGATGATAGTGAAAGTGGTGAGAGAGAAGAGAAAAGAAATTGAAGAAGGAAGGGTGAAAAGAGAGGAAGATACAATGCTAATGTCTAAATTGGTATATGGCATGATCCAAGAAGAGATTACTGAAAAAGAGATTATAGATAATGTGGTTTTGCTAGTTTTTGCAGCTCATGATACTACTTCTTTTGCTGTTGCTATGACATTCAAGATGCTTGCTCAACATCCTGATTGCTATGGTAAAGTTCTACAAGAACATATTAATATAATGAGAAACAAAGGAAGGGGTGAGAGTCTCAATGTAGAGGATATAAAGAAGATGAAGTATACATGGCAAGTTGCTAGAGAAAGCATGAGATTGTTCCCTCCAATATTTGGTTCTTTCAGGAAGGCAATTACTGATATTGAATATGAAGGGTTCACAATACCTAAAGGATGGAAGGTGCTATGGACAACATATGGGACACATTACAATGAAAAATATTTTAAGGATCCTTTAACTTTCAATCCAAGTAGATTTGAGGAAGGAATGCCACAATATGCATTTGTTCCCTTTGGAGGAGGGCCAAGATTGTGTGCAGGGTACCAATTAGCTAAGCTAAATATCCTAATCCTTGTGCATTATGTTGTCACACAATATGATTGGTCCTTACTCCATCTTGATGAAACAGTAACAATGGATCCTCTACCATTTCCTTCTCTTGGAATGCCTATTAGAATTTCACCTAAGCATATATGA 1440 0.3646 MIINIIYFLSCALFPLFVLFSFNFLRHKQQSNKHKTKLPPGDMGFPFIGETMEFFNAQRRNKLYEEFVHPRITKHGKIFKTRIIGSPTVIVNGAEANKFLLSNEFKLVKSSWPSSSVHLMGKDSIMEKDGERHRFLRGVIGTSLGYAGLETLVPKLCNFVKLYLSQNWHGQEEISLYRSTKVLTFSIVFECLLGIKVEPGMIDTFERVLEGVFSPAIKFPGSKFSRAMKARKEIEKMIVKVVREKRKEIEEGRVKREEDTMLMSKLVYGMIQEEITEKEIIDNVVLLVFAAHDTTSFAVAMTFKMLAQHPDCYGKVLQEHINIMRNKGRGESLNVEDIKKMKYTWQVARESMRLFPPIFGSFRKAITDIEYEGFTIPKGWKVLWTTYGTHYNEKYFKDPLTFNPSRFEEGMPQYAFVPFGGGPRLCAGYQLAKLNILILVHYVVTQYDWSLLHLDETVTMDPLPFPSLGMPIRISPKHI* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3281 479 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3281 479 PRINTS E-class P450 group I signature 279 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3281 479 PRINTS E-class P450 group I signature 299 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3281 479 PRINTS E-class P450 group I signature 385 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3281 479 PRINTS E-class P450 group I signature 416 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3281 479 PRINTS E-class P450 group I signature 426 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3281 479 PANTHER CYTOCHROME P450 26 18 476 - -
Tpr4g3281 479 PRINTS P450 superfamily signature 290 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3281 479 PRINTS P450 superfamily signature 346 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3281 479 PRINTS P450 superfamily signature 417 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3281 479 PRINTS P450 superfamily signature 426 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3281 479 Pfam Cytochrome P450 39 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3281 479 PANTHER TAXADIENE 5-ALPHA HYDROXYLASE 18 476 - -
Tpr4g3281 479 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 419 428 IPR017972 GO:0005506|GO:0016705
Tpr4g3281 479 Gene3D Cytochrome P450 27 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3281 479 SUPERFAMILY Cytochrome P450 33 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3281 Tpr-Chr4 38811775 38813836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3281 38 382 Cytochrome P450 AT2G42850 65.607 1.05e-157 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3281 - - gmx:100793336 766.918