Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3276 ATGAGTATCTCTACGTTTTCGATGGATACCAGTAAGCTCCAGTCTCGTTTCTCACTCGGCAGACAATCCTCACTCGCACCTGATCGCCAAGATTCCGCCGCCACCGTCAACGACTCCGTAACGGAGCCAATTGATCCTCCGGTTCGGTTGATGTATTTAACAAACGAAGGAGACTTAGAAGGAATCAACGAACTTTTAGACGGTGGCAGTGACGTCAATTTCAGAGATATTGACGGCCGCACCGCTCTCCATATCGCCGCATGTCAAGGACGCACCGATGTTGTTCAATTGTTGCTCCGAAGAGGTGCTGAAGTTGATCCTCAAGATCGTTGGTGTAGCACTCCTCTTGCTGATGCATTGTATTACAAGAATCATGATGTTGTTAAACTTTTGGAGCAACATGGTGCTAAACCTCCTGTGGCTCCTATGCATGTCCAGAATGCCCGGGAAGTCCCAGAATATGAGATTGATCCTTCTGAACTCGATTTTACAAATAGTGTTTGCATAACAAAGGGAACTTTCCGGAAAGCATTATGGCGTGGAATTCAAGTGGCCGTTAAAACTCTTGGGGAGGAAGTGTTCACCGATGACAATAAAGTAAAGGCATTTCACGACGAGCTTACATTACTTCAGAAAGTAAGGCATCCAAATGTTGTCCAATTTTTGGGTGCCGTTACACAAAGCACTCCGATGATGATTGTCACAGAATATCTACCCGAGGGGGATCTTCGTGACTATTTGAAGCGGAAAGGTGCATTAAAACCAATAACAGCTGTGAAGTTTGCACTTGATATTGCTAGGGGGATGAATTATTTGCATGAACATAAACCTGAAGCCATTATACACCGAGATCTTGAGCCTTCAAATATTCTCCGGGATGATTCTGGACATCTGAAAGTTGCAGACTTTGGAGTTAGCAAGTCACTCAAAATCACTAAAACAGTCAAAGAAGACAAACCTGTGACATGCGAGGATACATCATGGCGGTATGTTGCACCAGAGGTCTACAGAAATGAAGAATATGACACCAAAGCGGATGTCTTTTCCTTTTCTCTGATATTACAAGAGATGATTGAAGGTTGTCCTCCATTTTATAGAAAGCCAGAAAAAGAAGTTCCTAAAGCATATGTGGAAAATGAGCGTCCACCATTCAGGGCTGCACCAAAGCTTTATGCTTATGGATTAAAAGCCTTAATTGAGGAATGTTGGGATGGAGAACCATACCGAAGACCAACATTTAGCGAAATAATTGAGAGGTTGGATAAGATAAACCACCAATTTGCTCAAAAGAAGCGCTGGAAGGCTCTGGCTCCTTCATGCATCTGGAATCTGGAGGCCTTGTTTAAGGGGTATCCTACAAGTCCTGGTAGTCGATCATCTCGCTCTACGGTTAGATAA 1398 0.4378 MSISTFSMDTSKLQSRFSLGRQSSLAPDRQDSAATVNDSVTEPIDPPVRLMYLTNEGDLEGINELLDGGSDVNFRDIDGRTALHIAACQGRTDVVQLLLRRGAEVDPQDRWCSTPLADALYYKNHDVVKLLEQHGAKPPVAPMHVQNAREVPEYEIDPSELDFTNSVCITKGTFRKALWRGIQVAVKTLGEEVFTDDNKVKAFHDELTLLQKVRHPNVVQFLGAVTQSTPMMIVTEYLPEGDLRDYLKRKGALKPITAVKFALDIARGMNYLHEHKPEAIIHRDLEPSNILRDDSGHLKVADFGVSKSLKITKTVKEDKPVTCEDTSWRYVAPEVYRNEEYDTKADVFSFSLILQEMIEGCPPFYRKPEKEVPKAYVENERPPFRAAPKLYAYGLKALIEECWDGEPYRRPTFSEIIERLDKINHQFAQKKRWKALAPSCIWNLEALFKGYPTSPGSRSSRSTVR* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3276 465 PIRSF ILK 2 442 - -
Tpr4g3276 465 ProSiteProfiles Ankyrin repeat profile. 78 110 IPR002110 GO:0005515
Tpr4g3276 465 MobiDBLite consensus disorder prediction 18 38 - -
Tpr4g3276 465 SUPERFAMILY Protein kinase-like (PK-like) 168 421 IPR011009 -
Tpr4g3276 465 ProSiteProfiles Protein kinase domain profile. 163 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g3276 465 Pfam Ankyrin repeats (3 copies) 50 138 IPR002110 GO:0005515
Tpr4g3276 465 PRINTS Ankyrin repeat signature 79 94 IPR002110 GO:0005515
Tpr4g3276 465 PRINTS Ankyrin repeat signature 127 141 IPR002110 GO:0005515
Tpr4g3276 465 Pfam Protein tyrosine and serine/threonine kinase 172 420 IPR001245 GO:0004672|GO:0006468
Tpr4g3276 465 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 17 448 - -
Tpr4g3276 465 CDD STKc_MAP3K-like 169 420 - -
Tpr4g3276 465 ProSiteProfiles Ankyrin repeat region circular profile. 78 110 - -
Tpr4g3276 465 SUPERFAMILY Ankyrin repeat 50 141 IPR036770 -
Tpr4g3276 465 Gene3D - 43 150 IPR036770 -
Tpr4g3276 465 SMART ANK_2a 45 74 IPR002110 GO:0005515
Tpr4g3276 465 SMART ANK_2a 78 107 IPR002110 GO:0005515
Tpr4g3276 465 SMART ANK_2a 111 140 IPR002110 GO:0005515
Tpr4g3276 465 PANTHER INTEGRIN-LINKED KINASE FAMILY PROTEIN 17 448 - -
Tpr4g3276 465 PRINTS Tyrosine kinase catalytic domain signature 235 248 IPR001245 GO:0004672|GO:0006468
Tpr4g3276 465 PRINTS Tyrosine kinase catalytic domain signature 274 292 IPR001245 GO:0004672|GO:0006468
Tpr4g3276 465 PRINTS Tyrosine kinase catalytic domain signature 345 367 IPR001245 GO:0004672|GO:0006468
Tpr4g3276 465 PRINTS Tyrosine kinase catalytic domain signature 391 413 IPR001245 GO:0004672|GO:0006468
Tpr4g3276 465 Gene3D Transferase(Phosphotransferase) domain 1 161 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3276 Tpr-Chr4 38761392 38767450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3276 8 435 MAP Kinase Kinase Kinase AT4G18950 65.741 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Tpr4g3276 PK_Tyr_Ser-Thr 4.2e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3276 - - gmx:100795964 753.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3276 4 38761392 38767450 Tpr3g3375 3 37263432 37270941 PCT