Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr4g3276 | ATGAGTATCTCTACGTTTTCGATGGATACCAGTAAGCTCCAGTCTCGTTTCTCACTCGGCAGACAATCCTCACTCGCACCTGATCGCCAAGATTCCGCCGCCACCGTCAACGACTCCGTAACGGAGCCAATTGATCCTCCGGTTCGGTTGATGTATTTAACAAACGAAGGAGACTTAGAAGGAATCAACGAACTTTTAGACGGTGGCAGTGACGTCAATTTCAGAGATATTGACGGCCGCACCGCTCTCCATATCGCCGCATGTCAAGGACGCACCGATGTTGTTCAATTGTTGCTCCGAAGAGGTGCTGAAGTTGATCCTCAAGATCGTTGGTGTAGCACTCCTCTTGCTGATGCATTGTATTACAAGAATCATGATGTTGTTAAACTTTTGGAGCAACATGGTGCTAAACCTCCTGTGGCTCCTATGCATGTCCAGAATGCCCGGGAAGTCCCAGAATATGAGATTGATCCTTCTGAACTCGATTTTACAAATAGTGTTTGCATAACAAAGGGAACTTTCCGGAAAGCATTATGGCGTGGAATTCAAGTGGCCGTTAAAACTCTTGGGGAGGAAGTGTTCACCGATGACAATAAAGTAAAGGCATTTCACGACGAGCTTACATTACTTCAGAAAGTAAGGCATCCAAATGTTGTCCAATTTTTGGGTGCCGTTACACAAAGCACTCCGATGATGATTGTCACAGAATATCTACCCGAGGGGGATCTTCGTGACTATTTGAAGCGGAAAGGTGCATTAAAACCAATAACAGCTGTGAAGTTTGCACTTGATATTGCTAGGGGGATGAATTATTTGCATGAACATAAACCTGAAGCCATTATACACCGAGATCTTGAGCCTTCAAATATTCTCCGGGATGATTCTGGACATCTGAAAGTTGCAGACTTTGGAGTTAGCAAGTCACTCAAAATCACTAAAACAGTCAAAGAAGACAAACCTGTGACATGCGAGGATACATCATGGCGGTATGTTGCACCAGAGGTCTACAGAAATGAAGAATATGACACCAAAGCGGATGTCTTTTCCTTTTCTCTGATATTACAAGAGATGATTGAAGGTTGTCCTCCATTTTATAGAAAGCCAGAAAAAGAAGTTCCTAAAGCATATGTGGAAAATGAGCGTCCACCATTCAGGGCTGCACCAAAGCTTTATGCTTATGGATTAAAAGCCTTAATTGAGGAATGTTGGGATGGAGAACCATACCGAAGACCAACATTTAGCGAAATAATTGAGAGGTTGGATAAGATAAACCACCAATTTGCTCAAAAGAAGCGCTGGAAGGCTCTGGCTCCTTCATGCATCTGGAATCTGGAGGCCTTGTTTAAGGGGTATCCTACAAGTCCTGGTAGTCGATCATCTCGCTCTACGGTTAGATAA | 1398 | 0.4378 | MSISTFSMDTSKLQSRFSLGRQSSLAPDRQDSAATVNDSVTEPIDPPVRLMYLTNEGDLEGINELLDGGSDVNFRDIDGRTALHIAACQGRTDVVQLLLRRGAEVDPQDRWCSTPLADALYYKNHDVVKLLEQHGAKPPVAPMHVQNAREVPEYEIDPSELDFTNSVCITKGTFRKALWRGIQVAVKTLGEEVFTDDNKVKAFHDELTLLQKVRHPNVVQFLGAVTQSTPMMIVTEYLPEGDLRDYLKRKGALKPITAVKFALDIARGMNYLHEHKPEAIIHRDLEPSNILRDDSGHLKVADFGVSKSLKITKTVKEDKPVTCEDTSWRYVAPEVYRNEEYDTKADVFSFSLILQEMIEGCPPFYRKPEKEVPKAYVENERPPFRAAPKLYAYGLKALIEECWDGEPYRRPTFSEIIERLDKINHQFAQKKRWKALAPSCIWNLEALFKGYPTSPGSRSSRSTVR* | 466 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr4g3276 | 465 | PIRSF | ILK | 2 | 442 | - | - | |
Tpr4g3276 | 465 | ProSiteProfiles | Ankyrin repeat profile. | 78 | 110 | IPR002110 | GO:0005515 | |
Tpr4g3276 | 465 | MobiDBLite | consensus disorder prediction | 18 | 38 | - | - | |
Tpr4g3276 | 465 | SUPERFAMILY | Protein kinase-like (PK-like) | 168 | 421 | IPR011009 | - | |
Tpr4g3276 | 465 | ProSiteProfiles | Protein kinase domain profile. | 163 | 428 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr4g3276 | 465 | Pfam | Ankyrin repeats (3 copies) | 50 | 138 | IPR002110 | GO:0005515 | |
Tpr4g3276 | 465 | PRINTS | Ankyrin repeat signature | 79 | 94 | IPR002110 | GO:0005515 | |
Tpr4g3276 | 465 | PRINTS | Ankyrin repeat signature | 127 | 141 | IPR002110 | GO:0005515 | |
Tpr4g3276 | 465 | Pfam | Protein tyrosine and serine/threonine kinase | 172 | 420 | IPR001245 | GO:0004672|GO:0006468 | |
Tpr4g3276 | 465 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 17 | 448 | - | - | |
Tpr4g3276 | 465 | CDD | STKc_MAP3K-like | 169 | 420 | - | - | |
Tpr4g3276 | 465 | ProSiteProfiles | Ankyrin repeat region circular profile. | 78 | 110 | - | - | |
Tpr4g3276 | 465 | SUPERFAMILY | Ankyrin repeat | 50 | 141 | IPR036770 | - | |
Tpr4g3276 | 465 | Gene3D | - | 43 | 150 | IPR036770 | - | |
Tpr4g3276 | 465 | SMART | ANK_2a | 45 | 74 | IPR002110 | GO:0005515 | |
Tpr4g3276 | 465 | SMART | ANK_2a | 78 | 107 | IPR002110 | GO:0005515 | |
Tpr4g3276 | 465 | SMART | ANK_2a | 111 | 140 | IPR002110 | GO:0005515 | |
Tpr4g3276 | 465 | PANTHER | INTEGRIN-LINKED KINASE FAMILY PROTEIN | 17 | 448 | - | - | |
Tpr4g3276 | 465 | PRINTS | Tyrosine kinase catalytic domain signature | 235 | 248 | IPR001245 | GO:0004672|GO:0006468 | |
Tpr4g3276 | 465 | PRINTS | Tyrosine kinase catalytic domain signature | 274 | 292 | IPR001245 | GO:0004672|GO:0006468 | |
Tpr4g3276 | 465 | PRINTS | Tyrosine kinase catalytic domain signature | 345 | 367 | IPR001245 | GO:0004672|GO:0006468 | |
Tpr4g3276 | 465 | PRINTS | Tyrosine kinase catalytic domain signature | 391 | 413 | IPR001245 | GO:0004672|GO:0006468 | |
Tpr4g3276 | 465 | Gene3D | Transferase(Phosphotransferase) domain 1 | 161 | 430 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr4g3276 | Tpr-Chr4 | 38761392 | 38767450 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr4g3276 | 8 | 435 | MAP Kinase Kinase Kinase | AT4G18950 | 65.741 | 0.0 | 578 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | TKL-Pl-5 | Tpr4g3276 | PK_Tyr_Ser-Thr | 4.2e-55 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr4g3276 | - | - | gmx:100795964 | 753.436 |