Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3269 ATGGAGTTCAATATACTTTTTTTGTTACTTCTCATTGGTTCTACTTCATTGATTTTCATCTCACACTTGGCTTCAGCTGCTACACCAAAGCTCAACACTCAAGACGTGAAGGCATTGAAGGAAATAGGGAACAAGATTGGGAAAAAAGATTGGGATTTTGGAGTGGATCCTTGCAGTGGAAAAGGAAAATGGAATATTTCAGAATCTTCTACTAGAAAAGGCTTTGAGAGTTCTGTGGTTTGTAATTGTTCTTTCAACCATAATTCTTCTTGCCATGTTGTAAGCATATCCTTGAAGGCTCAAAATCTAACAGGCACTCTCTCACCAGAGTTTTCGAAGCTTCGTTATCTAAAAATATTGGACCTTAGTCGTAACATCATCACCGGTTCTATACCTCCACAATGGGCTACAATGAATTTGGTCGAGTTATCTTTAATGGGAAACAGATTATCAGGACCATTCCCTAAAGTTCTTACCAATATTACAACCCTAAAAAATGTGAGTATTGAAGGAAATATGTTTTCAGGCATTATTCCAACCGAAATCGGGAAGTTGATCAACTTAGAAAAACTCGTTCTACAATCAAATGGATTCACAGGAGCATTGCCGTCCGCGCTTTCCAAGTTGACCAAGTTGACTGATTTGAGGTTAAGTGACAATAACTTCTCCGGCAAGATACCTGATTTCATTAGTAAATGGACAGTAATCGAAAAGCTGCACATTCAAGGTTGCTCTCTTGAGGGGCCTATACCATCCAGCATTTCTGCATTGACAAAATTAAGTGATTTGAGGATAACTGATTTGAATGGTAGCAAAAGCTCTAATTTTCCACCACTTAATAATATGAAATCCATGAAGACGCTAGTTTTGAGAAAATGCATGATTAAAGGAGAGATCCCGGAATATATTGGATTAATGGAAAAACTGAAAATCTTAGATTTGAGTTTCAATAGCTTGAGCGGAAAGGTACCTGGTTCTTTTGAAGAGCTCGATAAAGTGGACTACATGTATCTTACATCGAACAACTTATCAGGAACGATACCTAGCTGGGTCCTTAAAAATAACAAAAATATTGATGTCTCTTACAATAACTTTGAATGGGAAAGCGCAAGTCCAACTGAATGTCAACGAGGGAGCGTAAACACGGTTGAGAGCTACTCTTTATCAGCGACTAAGAAAAGTAACATTAATTCATGCTTAAAAAGAAACTTCCCGTGCTCGGATCCACGACATTACTCCCTGCACATTAATTGTGGCGGTAATGAAGCAAATGTAAGTGATAAAATCTATAATGCTGACATAGAACGAAAAGGCGCTTCAATGTTCTACTCCACTCAGGATTGGGCTCTTAGCAGCACAGGGAGCTTCATGGACAACGATATCGACTCTGATCCCTATATTGTGACCAATACTTCTAGACTTCTTAATGTCTCACAAACCGATTCAAAACTGTACACAACAGCTCGTGTTTCGCCCCTCTCGCTCACATACTATGGCCTCTGTATGATAAATGGAAATTACACTGTAAAACTTCACTTTTCAGAGATAATTTTCGTCAGTGATAGGTCATTTAACAGTCTCGGGAGACGGATATTTGATGTCTACATCCAGGGGAACTTGGTTCTGAAAGACTTTGATATCGAACGAGAAGCTGGTGGTGCCGAAAAGCCAATTGTGAAGAAATTTAATGCTTCTGTCACACAGAATACTTTGAAGATTCAATTCTATTGGGCTGGAAAAGGAACCACCGGTATACCGACAAGAGGAGTTTATGGTCCTTTAGTATCTGCTATATCAGTTGATCCTAATTTTAAACCTCCATCAGATCATGGCAACAGAACTAAGGTCATAATACTGGCAGTTGGCATAACCAGTGGTGTTCTGGTTGTTGTCCTTATTATGCTGATTGTCTTGAGGAGGAAGGGATTGTTAGGAGGCAAGGATCCTGTGTATAAAGAGCTTAGGGGTATAGATCTGCAAACAGGATTGTTCACTTTAAGACAAATAAAAGAAGCTACCAAAAATTTCGATGCAGCAAATAAACTTGGCGAAGGTGGCTTTGGTTCTGTTTACAAGGGGCAACTACCAGATGGTACAGTAATTGCGGTAAAGCAGCTGTCGTCAAAATCAAAACAAGGAAACCGCGAGTTTGTGAATGAGATAGGAATGCTATCTGGACTTCAACATCCAAATCTTGTTAAGCTCCATGGATGTTGTGTGGAAGGGAACCAGCTAATACTGATATACGAGTATATGGAAAATAATTGTCTATCTCGCATTCTTTTCGGGAAGGGATCAGACAATAAAGCGAAACTGGACTGGCTTACCAGGAAGAAAATTTGCCTCGGCATAGCTAAAGCTTTGGCTTATCTTCATGAAGAGTCAAGAATCAAAATCATACATAGGGATATAAAGGCAAGTAATGTGTTGCTGGACAAGGATTTTAATGCTAAAATTTCAGATTTCGGTTTGGCCAAACTTATTGAAGATGACAAAACACATGTCAGCACTCGGATTGCAGGAACAATTGGTTATATGGCTCCTGAGTATGCAATGCGCGGTTACTTGACGGACAAAGCAGATGTTTATAGCTTTGGCGTTGTTGCATTGGAAACTATCAGTGGAAAGAGCAATACCAATTACAGGCCGGACGATGAGTTTTTCTACCTGCTTGATTGGGCCTATGTTTTACAAGAGAGAGGAACTCTTCTGGAGCTAGTTGATCCAGATTTGGGTTCAGAATATTCAACCGAGGAAGCAACGGTAATGCTAAATGTGGCTCTCTTGTGTACTAATGCATCTCCTACACTTAGGCCAACAATGTGCCAAGTTGTAAGCATGCTTGAAGGTTGGACCGACATTCAGGATCTCCTATCGGATCCGGGATATTCAGCTGCTGGTTCAAGTTCCAAACATAAGAGCATAAGAAGTCACTTCTGGGAGAATCCAAGCAGATCACAAAGCATGTCAATACCTACTATTTATACCGATTCCACAAACTCGCATGTTGAAACAGAAGAGAGCCATCATCTTGTAAAAATTAACTCGGTTGGATCAGACGAATGA 3066 0.3986 MEFNILFLLLLIGSTSLIFISHLASAATPKLNTQDVKALKEIGNKIGKKDWDFGVDPCSGKGKWNISESSTRKGFESSVVCNCSFNHNSSCHVVSISLKAQNLTGTLSPEFSKLRYLKILDLSRNIITGSIPPQWATMNLVELSLMGNRLSGPFPKVLTNITTLKNVSIEGNMFSGIIPTEIGKLINLEKLVLQSNGFTGALPSALSKLTKLTDLRLSDNNFSGKIPDFISKWTVIEKLHIQGCSLEGPIPSSISALTKLSDLRITDLNGSKSSNFPPLNNMKSMKTLVLRKCMIKGEIPEYIGLMEKLKILDLSFNSLSGKVPGSFEELDKVDYMYLTSNNLSGTIPSWVLKNNKNIDVSYNNFEWESASPTECQRGSVNTVESYSLSATKKSNINSCLKRNFPCSDPRHYSLHINCGGNEANVSDKIYNADIERKGASMFYSTQDWALSSTGSFMDNDIDSDPYIVTNTSRLLNVSQTDSKLYTTARVSPLSLTYYGLCMINGNYTVKLHFSEIIFVSDRSFNSLGRRIFDVYIQGNLVLKDFDIEREAGGAEKPIVKKFNASVTQNTLKIQFYWAGKGTTGIPTRGVYGPLVSAISVDPNFKPPSDHGNRTKVIILAVGITSGVLVVVLIMLIVLRRKGLLGGKDPVYKELRGIDLQTGLFTLRQIKEATKNFDAANKLGEGGFGSVYKGQLPDGTVIAVKQLSSKSKQGNREFVNEIGMLSGLQHPNLVKLHGCCVEGNQLILIYEYMENNCLSRILFGKGSDNKAKLDWLTRKKICLGIAKALAYLHEESRIKIIHRDIKASNVLLDKDFNAKISDFGLAKLIEDDKTHVSTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALETISGKSNTNYRPDDEFFYLLDWAYVLQERGTLLELVDPDLGSEYSTEEATVMLNVALLCTNASPTLRPTMCQVVSMLEGWTDIQDLLSDPGYSAAGSSSKHKSIRSHFWENPSRSQSMSIPTIYTDSTNSHVETEESHHLVKINSVGSDE* 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3269 1021 Gene3D - 410 602 - -
Tpr4g3269 1021 Gene3D Phosphorylase Kinase; domain 1 650 751 - -
Tpr4g3269 1021 CDD STKc_IRAK 682 950 - -
Tpr4g3269 1021 ProSiteProfiles Protein kinase domain profile. 676 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g3269 1021 Gene3D Ribonuclease Inhibitor 66 394 IPR032675 -
Tpr4g3269 1021 Pfam Malectin domain 413 598 IPR021720 -
Tpr4g3269 1021 Gene3D Transferase(Phosphotransferase) domain 1 752 960 - -
Tpr4g3269 1021 PANTHER LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KINASE-RELATED 69 986 - -
Tpr4g3269 1021 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 69 986 - -
Tpr4g3269 1021 Pfam Protein tyrosine and serine/threonine kinase 679 948 IPR001245 GO:0004672|GO:0006468
Tpr4g3269 1021 SMART serkin_6 676 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g3269 1021 SUPERFAMILY L domain-like 81 365 - -
Tpr4g3269 1021 Pfam Leucine rich repeat 285 343 IPR001611 GO:0005515
Tpr4g3269 1021 ProSitePatterns Serine/Threonine protein kinases active-site signature. 799 811 IPR008271 GO:0004672|GO:0006468
Tpr4g3269 1021 ProSitePatterns Protein kinases ATP-binding region signature. 682 704 IPR017441 GO:0005524
Tpr4g3269 1021 SUPERFAMILY Protein kinase-like (PK-like) 660 975 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3269 Tpr-Chr4 38722601 38731536 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3269 215 1012 Receptor kinase-like Gene Family AT1G07650 62.949 0.0 1004
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr4g3269 PK_Tyr_Ser-Thr 2.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3269 - - gmx:100305357 1652.88