Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3252 ATGAATGGTATTCTCCTTGTTGCTCTCCTTTTACTGATCCCAATTCTCTTTCTGCTAGGAAAAACCAAACAATCCAAAAGGGTTCCTCCAGGTTCACTTGGAATTCCCATTATTGGTCAAAGTCTTGGCTATCTTCGAGCTAGGCGCGCCAACATAGCAGAAAAATGGATTGAAGACAGAATCAACAAGTATGGTCCTATTTCAAAGCTTAGCCTATTTGGAAAACCAACTGTTTTGATTCATGGACAGGCTGCAAATAAGTTTATATTTACCAATGGCGGTGGCAATATTGTTAACATGCAAATACAGTCTATTAAGATGATATTAGGTGACAGGAACTTGCAAGAACTGAGTGGCAAAGATCTTAGCAGAGTTAGAGGTGCACTTGTCTCATTCTTGAAGCCAGAATCTTTGAAACAATATGTTTATAAAATTGATGAAGAAGTTAGGAGTCACATTCAGATGCATTGGGAAGGGAAACAGCAGGTCAAGGTATTGCCCCTAATGAAGACTCTCACATTCAACATAATTTCATCTCTTCTGTTTGGTCTTGAGAGTGGAAAACAAAGAGATCAATTCATGAACCCGTTCCAAGAATTGATGAAAGGGGTGCTGTCTGTCCCAATTAATATACCCTTCACGCGCTACAACCGCAGCCTCAAGGCAAGCGCAAGGATCCAAAACATGTTGAAGGAGATTGTGCACCAGAAGACAGTTGAACAGGAGAAAACTGGCGTCAATCCCCGCCAAGACTTAATCAGCTGCATGCTTAGCATGGTTGAAGATGACAAACAAATTTTAACTGAGAAGGAAATCATCCATAATGTTATGCTTTTCATGGTTGCAGGATATGACACATCATCTGTTCTAATCACTTTCATTATCCGGCTCTTGGCTAATGAACCAGCTATTTGTGCAGCTGTTCTTCAAGAACAGGAAGAGATAGCAAGAGGAAAGCTTTTAGGAGAGCCTCTAACATGGGAAGACCTTTCAAAGATGAAGTACACTTGGAGAGTAGCAATGGAAACTCTTAGAATGGTTCCTCCAGTCTTTGGTGGATTCAGAAAAGCAGCAACAGATATTGAATATGGTGGATACATTATACCTAAAGGGTGGCAGATCTTTTGGGTTACATCAATGACTCACATGGACAGCAACATTTTCCCAGAACCAACAAAGTTTGATCCATGTAGATTTGAAAACCAAGCATCTACACCACCCTATTGCTTTGTTCCATTTGGAGGGGGAGCAAGAATATGTCCAGGAAATGAGTTTGCTAGGGTTGAAACTCTGGTGGCAATTCATTACCTTGTGACTAAGTTCATTTGGAAGCGACTTTCAGACAATTCTTTCAGCAGGGATCCTATGCCAACACCAAATCAAGGCCTACTGATTGAACTTTGCCCAAGGAAACTATCGTAA 1422 0.4086 MNGILLVALLLLIPILFLLGKTKQSKRVPPGSLGIPIIGQSLGYLRARRANIAEKWIEDRINKYGPISKLSLFGKPTVLIHGQAANKFIFTNGGGNIVNMQIQSIKMILGDRNLQELSGKDLSRVRGALVSFLKPESLKQYVYKIDEEVRSHIQMHWEGKQQVKVLPLMKTLTFNIISSLLFGLESGKQRDQFMNPFQELMKGVLSVPINIPFTRYNRSLKASARIQNMLKEIVHQKTVEQEKTGVNPRQDLISCMLSMVEDDKQILTEKEIIHNVMLFMVAGYDTSSVLITFIIRLLANEPAICAAVLQEQEEIARGKLLGEPLTWEDLSKMKYTWRVAMETLRMVPPVFGGFRKAATDIEYGGYIIPKGWQIFWVTSMTHMDSNIFPEPTKFDPCRFENQASTPPYCFVPFGGGARICPGNEFARVETLVAIHYLVTKFIWKRLSDNSFSRDPMPTPNQGLLIELCPRKLS* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3252 473 Pfam Cytochrome P450 29 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3252 473 PANTHER OS07G0520300 PROTEIN 6 469 - -
Tpr4g3252 473 SUPERFAMILY Cytochrome P450 25 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3252 473 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3252 473 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3252 473 PRINTS E-class P450 group I signature 271 288 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3252 473 PRINTS E-class P450 group I signature 291 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3252 473 PRINTS E-class P450 group I signature 377 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3252 473 PRINTS E-class P450 group I signature 410 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3252 473 PRINTS E-class P450 group I signature 420 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3252 473 Gene3D Cytochrome P450 20 468 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3252 473 PANTHER CYTOCHROME P450 26 6 469 - -
Tpr4g3252 473 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 413 422 IPR017972 GO:0005506|GO:0016705
Tpr4g3252 473 PRINTS P450 superfamily signature 282 299 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3252 473 PRINTS P450 superfamily signature 338 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3252 473 PRINTS P450 superfamily signature 411 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3252 473 PRINTS P450 superfamily signature 420 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3252 Tpr-Chr4 38570285 38572695 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3252 5 450 Cytochrome P450 AT5G45340 31.778 3.03e-71 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3252 - - gmx:100790001 736.487