Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3251 ATGACTATTGTTCTCCTTGTTGCTCTCCTCTTACTCGTCCCAATTCTCTTTCTGCTAAAAAGAACCAAACCATCCAAAAGGGTCCCTCCAGGTTCACTTGGAATTCCCATTATTGGTCAACGTCTTGGCCTTCTTCGAGCTATGCGCGTCATCACAGCAGAAAAATGGATTGAAGACAGAACCAACAAGTATGGTCCTATTTCAAAGCTAAGCCTATTTGGAAAACTAACTGTTTTGATTCATGGACAGGCTGCAAATAAGTTTATATTCACCGATGACGGTGACAGTATTGTTAACCAGCAAACACGGTCTGTTAAGATGATATTAGGTGACAGGAACTTGTTGGAGCTGAGTGGCAAAGGTCATAGTAGAGTTAGAGGTGCACTTGTCTCATTCTTGAAGCCAGAATCTTTAAAACAATATGTTGGTAAAATTGATGAAGAAGTTAGGAGTCACATTCTGATGCATTGGGAAGGGAAGCAGCAGATCAAGGTATTGCCGCTGATGAAGACTCTCACATTCAACATAATTTGTTCTCTTCTGTTTGGTCTTGAGAGTGGAAAACAAAGAGATCAATTCATGAATCCCTTCCAAGCAATGATGAAAGGAATGTTGTCTGTCCCAATTAATATACCCTTCACGCGCTACAACCGCAGCCTCAAGGCAACTGCAAAGATCCAAAACATGTTGAAGGAGATTTGACAACAATCCCGCCAAGACTTAATCAGTTGCTTGCTTAACATGGTTGAAGATGACAAACAAGTTTTAACTGAGAAGGAAATCATCCATAATGCTGTGCTTGTCATGGTCGCAGGACATGACACATCGTCTGTTCTAATCACTTTCATTATCCGGCTATTGGCTAATGAACCAGCTATTTGTGCAGCTGTTTTTCAAGAACAGGAAGAGATAGCAAAAGGCAAGCTTTTAGGAGAGCCTCTGACATGGGAAGATCTTTCAAAGATGAAGTACACTTGGAGAGTAGCAATGGAAACTCTGAGAATGTTTCCTCCCATCTTTGGTGGCTTCAGAAAAGCGGCAACCGATATTAAATATGGTGGATACATTATACCCAAAGGGTGGCAGATCTTCTGGGTTACATCAATGACTCACATGGACAACAACATTTTCCCAGAACCGTCAAAGTTTGATCCGAGTAGATTCGAAAACCAAGCATCTACACCACCCTATTGCTTTGTTCCATTTGGAGGGGGAACAAGAATATGTCCAGGATATGTGTTTGCTAGGGTTGAAACTCTTGTGACAATTCATTACCTTGTGACTAAGTTCATTTGGAAGCTACTTTCAGACAATTCTTTCAGCAGGGATCCAATGCCAACGCCAACTCAAGGCCTACTGGTTGAACTTTGCTCGAGGAAACTATCTTAA 1389 0.4154 MTIVLLVALLLLVPILFLLKRTKPSKRVPPGSLGIPIIGQRLGLLRAMRVITAEKWIEDRTNKYGPISKLSLFGKLTVLIHGQAANKFIFTDDGDSIVNQQTRSVKMILGDRNLLELSGKGHSRVRGALVSFLKPESLKQYVGKIDEEVRSHILMHWEGKQQIKVLPLMKTLTFNIICSLLFGLESGKQRDQFMNPFQAMMKGMLSVPINIPFTRYNRSLKATAKIQNMLKEI*QQSRQDLISCLLNMVEDDKQVLTEKEIIHNAVLVMVAGHDTSSVLITFIIRLLANEPAICAAVFQEQEEIAKGKLLGEPLTWEDLSKMKYTWRVAMETLRMFPPIFGGFRKAATDIKYGGYIIPKGWQIFWVTSMTHMDNNIFPEPSKFDPSRFENQASTPPYCFVPFGGGTRICPGYVFARVETLVTIHYLVTKFIWKLLSDNSFSRDPMPTPTQGLLVELCSRKLS* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3251 461 PANTHER CYTOCHROME P450 26 3 457 - -
Tpr4g3251 461 SUPERFAMILY Cytochrome P450 24 458 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3251 461 Pfam Cytochrome P450 29 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3251 461 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3251 461 PRINTS E-class P450 group I signature 398 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3251 461 PRINTS E-class P450 group I signature 279 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3251 461 PRINTS E-class P450 group I signature 365 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3251 461 PRINTS E-class P450 group I signature 259 276 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3251 461 PRINTS E-class P450 group I signature 408 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3251 461 PANTHER OS07G0520300 PROTEIN 3 457 - -
Tpr4g3251 461 Gene3D Cytochrome P450 19 457 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3251 461 PRINTS P450 superfamily signature 408 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3251 461 PRINTS P450 superfamily signature 270 287 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3251 461 PRINTS P450 superfamily signature 326 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3251 461 PRINTS P450 superfamily signature 399 408 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr4g3251 461 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 401 410 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3251 Tpr-Chr4 38567557 38570036 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3251 3 438 Cytochrome P450 AT5G45340 32.731 1.76e-72 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3251 - - gmx:100790001 737.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3251 4 38567557 38570036 Tpr4g3251 4 38567557 38570036 ECH