LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr4g3251	ATGACTATTGTTCTCCTTGTTGCTCTCCTCTTACTCGTCCCAATTCTCTTTCTGCTAAAAAGAACCAAACCATCCAAAAGGGTCCCTCCAGGTTCACTTGGAATTCCCATTATTGGTCAACGTCTTGGCCTTCTTCGAGCTATGCGCGTCATCACAGCAGAAAAATGGATTGAAGACAGAACCAACAAGTATGGTCCTATTTCAAAGCTAAGCCTATTTGGAAAACTAACTGTTTTGATTCATGGACAGGCTGCAAATAAGTTTATATTCACCGATGACGGTGACAGTATTGTTAACCAGCAAACACGGTCTGTTAAGATGATATTAGGTGACAGGAACTTGTTGGAGCTGAGTGGCAAAGGTCATAGTAGAGTTAGAGGTGCACTTGTCTCATTCTTGAAGCCAGAATCTTTAAAACAATATGTTGGTAAAATTGATGAAGAAGTTAGGAGTCACATTCTGATGCATTGGGAAGGGAAGCAGCAGATCAAGGTATTGCCGCTGATGAAGACTCTCACATTCAACATAATTTGTTCTCTTCTGTTTGGTCTTGAGAGTGGAAAACAAAGAGATCAATTCATGAATCCCTTCCAAGCAATGATGAAAGGAATGTTGTCTGTCCCAATTAATATACCCTTCACGCGCTACAACCGCAGCCTCAAGGCAACTGCAAAGATCCAAAACATGTTGAAGGAGATTTGACAACAATCCCGCCAAGACTTAATCAGTTGCTTGCTTAACATGGTTGAAGATGACAAACAAGTTTTAACTGAGAAGGAAATCATCCATAATGCTGTGCTTGTCATGGTCGCAGGACATGACACATCGTCTGTTCTAATCACTTTCATTATCCGGCTATTGGCTAATGAACCAGCTATTTGTGCAGCTGTTTTTCAAGAACAGGAAGAGATAGCAAAAGGCAAGCTTTTAGGAGAGCCTCTGACATGGGAAGATCTTTCAAAGATGAAGTACACTTGGAGAGTAGCAATGGAAACTCTGAGAATGTTTCCTCCCATCTTTGGTGGCTTCAGAAAAGCGGCAACCGATATTAAATATGGTGGATACATTATACCCAAAGGGTGGCAGATCTTCTGGGTTACATCAATGACTCACATGGACAACAACATTTTCCCAGAACCGTCAAAGTTTGATCCGAGTAGATTCGAAAACCAAGCATCTACACCACCCTATTGCTTTGTTCCATTTGGAGGGGGAACAAGAATATGTCCAGGATATGTGTTTGCTAGGGTTGAAACTCTTGTGACAATTCATTACCTTGTGACTAAGTTCATTTGGAAGCTACTTTCAGACAATTCTTTCAGCAGGGATCCAATGCCAACGCCAACTCAAGGCCTACTGGTTGAACTTTGCTCGAGGAAACTATCTTAA	1389	0.4154	MTIVLLVALLLLVPILFLLKRTKPSKRVPPGSLGIPIIGQRLGLLRAMRVITAEKWIEDRTNKYGPISKLSLFGKLTVLIHGQAANKFIFTDDGDSIVNQQTRSVKMILGDRNLLELSGKGHSRVRGALVSFLKPESLKQYVGKIDEEVRSHILMHWEGKQQIKVLPLMKTLTFNIICSLLFGLESGKQRDQFMNPFQAMMKGMLSVPINIPFTRYNRSLKATAKIQNMLKEIQQSRQDLISCLLNMVEDDKQVLTEKEIIHNAVLVMVAGHDTSSVLITFIIRLLANEPAICAAVFQEQEEIAKGKLLGEPLTWEDLSKMKYTWRVAMETLRMFPPIFGGFRKAATDIKYGGYIIPKGWQIFWVTSMTHMDNNIFPEPSKFDPSRFENQASTPPYCFVPFGGGTRICPGYVFARVETLVTIHYLVTKFIWKLLSDNSFSRDPMPTPTQGLLVELCSRKLS	463

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Tpr4g3251	461	PANTHER	CYTOCHROME P450 26	3	457	-	-
Tpr4g3251	461	SUPERFAMILY	Cytochrome P450	24	458	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Tpr4g3251	461	Pfam	Cytochrome P450	29	439	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Tpr4g3251	461	PRINTS	E-class P450 group I signature	61	80	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Tpr4g3251	461	PRINTS	E-class P450 group I signature	398	408	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Tpr4g3251	461	PRINTS	E-class P450 group I signature	279	305	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Tpr4g3251	461	PRINTS	E-class P450 group I signature	365	389	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Tpr4g3251	461	PRINTS	E-class P450 group I signature	259	276	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Tpr4g3251	461	PRINTS	E-class P450 group I signature	408	431	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Tpr4g3251	461	PANTHER	OS07G0520300 PROTEIN	3	457	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr4g3251	Tpr-Chr4	38567557	38570036	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr4g3251	3	438	Cytochrome P450	AT5G45340	32.731	1.76e-72	234

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr4g3251	-		-	gmx:100790001	737.643

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tpr4g3251	4	38567557	38570036	Tpr4g3251	4	38567557	38570036	ECH

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