Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3235 ATGTTCTCCTTAAGCCCATTCCTTCTTTTTCTTCTCACCTGCACTCTCATTCATCAAGCATATTGTTCCTCAAATAAAGTTCGCAAGACTTACATTGTCTACATGGGTTCTCATCCAAAGGGCATTGACCTTGCCACTTTACCTTCTATTCACTCCACAATGGCTCAAAATGTCCTTGGCAGTGATTTTGAACCAGGAGCAGTACTTCACAGCTATAAGAAGAGCTTTAATGGATTCGTCGTGAAGTTGACACAAGATGAGGCAGAAGCATTGGCCGAAATGGACGATGTGATGTCTGTTTTTCCAAACAGAAAACATCATCTCCAGACAACAAAATCGTGGGACTTCATAGGCCTACCACAACAAGTCAATAGGATGAGTCTAGAGAGTGACATAATTGTTGGGGTAATAGACACAGGAATTTGGTCCAAGTCTAAGAGCTTCACTGATGAAGGATTTGGTCCTCCCCCAAAAAAATGGAAGGGATCATGCCACAACTTCACTTGCAACAATAAGATAATTGGCGCGCGATACTTTAATATTGAAGGATCCTATTCTAAAAAAGACATCAAAGGTCCAACAGATGTAGACGGGCACGGGTCACATTGTGCATCCACAGTTGCCGGAAATGTGGTTAGTTCTGTAAGCCTACAAGGGTATGCTTCAGGGACAGCACGCGGAGGAGTTCCTTCAGCACGCATTGCTGTGTACAAAGCATGTTGGGAAACACATTGTACAGATGCAGATATTCTCGCAGCTTTTGATGAAGCAATTGTTGATGGGGTTGATGTTATTTCTGTTTCACTTGGAACAAATGAAGTAGTATACTATGAATATTTTGTAGGTGCTATCAACATTGGAAGTTTCCATGCAATGAAAAGAGGTGTATTTACATCGAATGGTGCTAATAATTTAGGCCCAAATATTTCCAGTATGACAAACTATGCACCCTGGTTACTTTCGGTTGCTGCTAGCACTTTTGGTAGAAAGTTTGTTACAAAGGTACAATTGGGAAATGGCGCGGTTTATGAGGGATCCTCAATTAACACATTTGATCTCAGAAAAAAAATGTTTCCAATAATTTTCGCAAGAGATATACCTAACGCAACCGGTGGATTTAACAGCTCTCTATCTAGGTTCTGTGTCAAGGACTCTGTAGATAAAGATGCAGTGAAGGGGAAAATAGTTTTATGTGAGGGCATTATACAAGTGGGGGTTTTCTCTGGGGCGGCTGGTGTAATATTTGGAGATGCTACAACAAAAGATTCGCCACATAATTTTGCATTGCCAGCAACGTTCCTTAGTTTAAGGGACCTAAGGGAAATAGAATATTATTACTTGAAATCAAAAAGAAATGCAACTGCCACAATATTTAAGAGTGAAGAAGTGGAAGATTTATTGTCCCCTTATATAGCTTCCTTTTCATCAAGAGGTCCAAACCCAGTTACACCAAATACTCTCAAGCCTGATATCGCTGCTCCGGGAAATAATGTTATAGCTGCATGGACTCAACTAAACCCGATTTCTGAAATTGAAGATGATAAAAGAATATTACCATATAATATTATCTCCGGAACATCAATGGCTTGCCCTCATGCCGCTGCAGCAGCTGCGTACGTTAAATCATTTCACCCCAATTGGTCTCCTGCTAGGATCAAGTCTGCGTTAATGACCACCGCTACTCCAATGAGCTCTTCTCTAAATCCTGAAGCTGAATTTGCATATGGCGCGGGGCTAATTAATCCTGTTAAAGCAGCAAATCCAGGTTTAGTATATGATATCAGTGAAGCAGATTATGCTGAGTTCTTGTGCGGAGAAGGGTATACATCTAAAGAATTACGAATTCTCACTCAAGATAAAACTACTTGCAAAGGAAAAGATAATGAGAAAGCCGTATACAACTTGAATCTCCCATCATTTGCAGTTTATGTAAACGACACATTTTCCGGTTATGTTTATCATAGAACCGTTACAAATGTGGGATCGGCAAACTCTACTTATAAAGCAAGAGTAATATCTTCATTTTTGCTGGGAATTGAAGTGATACCTGATGTTTTGTCCTTCACATCTATAGGGCAGAAAAAATCATTCTCTCTCACAATTGAAGGGCAAATCAATGTGGAAATGATATCTGCTTCTTTGATTTGGGATGATGGGAATTATCAAGTTAGAAGCCCAATTGTGGTGTATGGGAGCTAG 2199 0.4011 MFSLSPFLLFLLTCTLIHQAYCSSNKVRKTYIVYMGSHPKGIDLATLPSIHSTMAQNVLGSDFEPGAVLHSYKKSFNGFVVKLTQDEAEALAEMDDVMSVFPNRKHHLQTTKSWDFIGLPQQVNRMSLESDIIVGVIDTGIWSKSKSFTDEGFGPPPKKWKGSCHNFTCNNKIIGARYFNIEGSYSKKDIKGPTDVDGHGSHCASTVAGNVVSSVSLQGYASGTARGGVPSARIAVYKACWETHCTDADILAAFDEAIVDGVDVISVSLGTNEVVYYEYFVGAINIGSFHAMKRGVFTSNGANNLGPNISSMTNYAPWLLSVAASTFGRKFVTKVQLGNGAVYEGSSINTFDLRKKMFPIIFARDIPNATGGFNSSLSRFCVKDSVDKDAVKGKIVLCEGIIQVGVFSGAAGVIFGDATTKDSPHNFALPATFLSLRDLREIEYYYLKSKRNATATIFKSEEVEDLLSPYIASFSSRGPNPVTPNTLKPDIAAPGNNVIAAWTQLNPISEIEDDKRILPYNIISGTSMACPHAAAAAAYVKSFHPNWSPARIKSALMTTATPMSSSLNPEAEFAYGAGLINPVKAANPGLVYDISEADYAEFLCGEGYTSKELRILTQDKTTCKGKDNEKAVYNLNLPSFAVYVNDTFSGYVYHRTVTNVGSANSTYKARVISSFLLGIEVIPDVLSFTSIGQKKSFSLTIEGQINVEMISASLIWDDGNYQVRSPIVVYGS* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3235 732 ProSitePatterns Serine proteases, subtilase family, serine active site. 525 535 IPR023828 -
Tpr4g3235 732 PANTHER PUTATIVE-RELATED 19 730 - -
Tpr4g3235 732 CDD Peptidases_S8_3 106 561 IPR034197 -
Tpr4g3235 732 CDD PA_subtilisin_like 335 457 - -
Tpr4g3235 732 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 730 IPR045051 -
Tpr4g3235 732 Gene3D Peptidase S8/S53 domain 131 599 IPR036852 GO:0004252|GO:0006508
Tpr4g3235 732 Pfam Fibronectin type-III domain 634 729 IPR041469 -
Tpr4g3235 732 Gene3D - 328 464 - -
Tpr4g3235 732 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 109 IPR037045 -
Tpr4g3235 732 Pfam Subtilase family 130 578 IPR000209 GO:0006508|GO:0008236
Tpr4g3235 732 SUPERFAMILY Subtilisin-like 108 590 IPR036852 GO:0004252|GO:0006508
Tpr4g3235 732 Pfam Peptidase inhibitor I9 30 108 IPR010259 -
Tpr4g3235 732 PRINTS Subtilisin serine protease family (S8) signature 129 148 IPR015500 -
Tpr4g3235 732 PRINTS Subtilisin serine protease family (S8) signature 195 208 IPR015500 -
Tpr4g3235 732 PRINTS Subtilisin serine protease family (S8) signature 524 540 IPR015500 -
Tpr4g3235 732 ProSiteProfiles Serine proteases, subtilase domain profile. 113 586 - -
Tpr4g3235 732 Gene3D - 603 731 - -
Tpr4g3235 732 ProSitePatterns Serine proteases, subtilase family, histidine active site. 199 209 IPR022398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3235 Tpr-Chr4 38418076 38425780 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3235 11 730 Subtilisin-like Serine Gene Family AT3G46850 46.164 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3235 - - gmx:100787973 985.326