Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3233 ATGAGCTCTACTATAAATCCTGAGGCTGAATTCGCATCCGGTGCATGGCAAATTAGTCCTGTTAAGGCAACGGATCCAGGTTTAGTATATGATATTAGTGAAGCAGATTATATTGAATTCTTGTGCGGAGAAGGGTACACGACTAAACAACTAAAAATTCTTACTCATCATAAGAGTGCTTGCAAGGGTAATGCTAATAAGAACGCGGTATACAACTTGAACCTACCTTCATTCGCACTTAAAGTAAACGATACATTTATCGGTACTTTTAATAGAACTGTTACAAATGTGGGATCAGCAAATTCTACTTATAAAGCAAGAGTAATGTCTTCATCTTTGTTGGAAATTCAAGTGATACCGGATGTTTTGTCCTTCACATCTTTAGGGCAAAAAAATCATTCTCTCTCACAATAG 414 0.3671 MSSTINPEAEFASGAWQISPVKATDPGLVYDISEADYIEFLCGEGYTTKQLKILTHHKSACKGNANKNAVYNLNLPSFALKVNDTFIGTFNRTVTNVGSANSTYKARVMSSSLLEIQVIPDVLSFTSLGQKNHSLSQ* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3233 137 Gene3D Peptidase S8/S53 domain 3 37 IPR036852 GO:0004252|GO:0006508
Tpr4g3233 137 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 132 IPR045051 -
Tpr4g3233 137 Gene3D - 41 134 - -
Tpr4g3233 137 Pfam Fibronectin type-III domain 72 132 IPR041469 -
Tpr4g3233 137 PANTHER PUTATIVE-RELATED 2 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3233 Tpr-Chr4 38385092 38385505 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3233 2 131 Subtilisin-like Serine Gene Family AT3G46850 46.212 8.48e-31 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3233 - - lja:Lj0g3v0313849.1 178.333