Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3210 ATGGCTGAGATTTGTTGTGGTGTTGTTGGAGCCGGAGAAACTCCGACTCCAACTATCGAACCAAATTCACGAAACTCCGTTCGCCGGAGTTTGGATTTTCTTCCGTTGAAATACATAGCTGACATGGCAATTCCGTCGGAAAATATTAGCCGGAAACGTCAGAAGCTAGATCCATCTACGAAAAAAGGAGTTGTCAGTTCCGAATCCAGTACGAATGAAAAATCTACGAAAAACGAAGTTGTCTTGGTTGCGAATTGTTCGAATGTTTCTGAGGCAGAAAACGAGGTTGTTGTTGTTGAAGATTGTCCCAAGTATGGAATAACATCAGTTTGTGGAAGAAGAAGAGAAATGGAAGATTCTGTTTCGGTGCATCCATCGTTTTGTGAAGAAAAAAGTGAACAAAATCAGAACCCGTTTCATTTCTTCGGTGTTTTCGATGGCCATGGTTGTTCACATGTTGCAACTATGTGTAAACAAAGGTTACATGAAATTGTTGATGATGAAATAACCAAAAACAGAGAGAAAGAGAGCGTTGACTGGAAGTCAACGATGGAGAAGAGTTTCATTCGCATGGATAAAGAGGTTTTGAATTCCACCAAGACAAAACAGAGTTTCACTTGTAAGTGTGAGCTTCAAACTCCTCATTGTGACGCTGTTGGTTCCACCGCTGTTGTTGCCGTTGTCACGCCGGAGAAAATTGTTGTTTCCAATTGTGGTGATTCTCGTGCTGTTCTTTGCCGGAACGGTGTCGCCATTCCCCTTTCCTCCGATCACAAGCCGGATCGACCCGATGAGTTGGATCGGATCAACTCCGCCGGAGGACGCGTGATCTATTGGGATGGTGCAAGAGTGCTTGGAGTGTTGGCCATGTCTAGAGCCATTGGGGACAATTATTTGAAACCGTATGTTATTTCGGAACCAGAGGTAACGGTAACGGAGAGGAGTGACGAGGATGAGTGTTTGATTTTGGCGAGTGATGGTTTATGGGATGTGGTGGAAAATGATACGGCGTGTAGGGTAGTGCAGATGTGTTTAAAGGCGGAGAAGACGGTGTCGCCGCCGGGGTCACCAGGGAGTGTAGTGACGGGAGTTGGGTCAGATAAGGCTTGTTCCGATGCTTCAATTTTGTTGACGAAGTTGGCTTTGGCAAGGCATAGTTCGGACAATGTTAGCGTGGTGGTTGTTGATTTGAGGAGAGATCAACGTCAACAATAA 1215 0.4519 MAEICCGVVGAGETPTPTIEPNSRNSVRRSLDFLPLKYIADMAIPSENISRKRQKLDPSTKKGVVSSESSTNEKSTKNEVVLVANCSNVSEAENEVVVVEDCPKYGITSVCGRRREMEDSVSVHPSFCEEKSEQNQNPFHFFGVFDGHGCSHVATMCKQRLHEIVDDEITKNREKESVDWKSTMEKSFIRMDKEVLNSTKTKQSFTCKCELQTPHCDAVGSTAVVAVVTPEKIVVSNCGDSRAVLCRNGVAIPLSSDHKPDRPDELDRINSAGGRVIYWDGARVLGVLAMSRAIGDNYLKPYVISEPEVTVTERSDEDECLILASDGLWDVVENDTACRVVQMCLKAEKTVSPPGSPGSVVTGVGSDKACSDASILLTKLALARHSSDNVSVVVVDLRRDQRQQ* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3210 404 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 34 403 - -
Tpr4g3210 404 MobiDBLite consensus disorder prediction 60 76 - -
Tpr4g3210 404 ProSitePatterns PPM-type phosphatase domain signature. 141 149 IPR000222 GO:0043169
Tpr4g3210 404 SMART PP2C_4 89 395 IPR001932 -
Tpr4g3210 404 MobiDBLite consensus disorder prediction 50 76 - -
Tpr4g3210 404 CDD PP2Cc 104 348 IPR001932 -
Tpr4g3210 404 Pfam Protein phosphatase 2C 104 389 IPR001932 -
Tpr4g3210 404 SUPERFAMILY PP2C-like 102 398 IPR036457 -
Tpr4g3210 404 ProSiteProfiles PPM-type phosphatase domain profile. 104 397 IPR001932 -
Tpr4g3210 404 PANTHER ALPHABET, ISOFORM E-RELATED 34 403 - -
Tpr4g3210 404 Gene3D - 91 404 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3210 Tpr-Chr4 38084989 38087196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3210 103 404 PP2C-type Phosphatase Gene Family AT1G07430 62.462 2.45e-147 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3210 K14497 - gmx:100776356 505.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3210 4 38084989 38087196 Tpr4g3210 4 38084989 38087196 ECH
Tpr3g0071 3 896944 899346 Tpr4g3210 4 38084989 38087196 PCT