Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3206 ATGGCGAATTGGTTGAACCGGGTCGGGTTACGAAGAGACCAAGACTTCGAAAACAACAGCGGTATCGTTACTCCAACGTTGAGTAACAACAGCAACAGCAACACCGTTAACATTAACGGTAACGTTAACGGAGAAGGTGAAAACAGCACCGGCCGTGTCAGCAGTGGACAGAACACCGGAAGTGGCGGACGCCGTCCACGTGGACGTCCGCCTGGTTCAAGGAACAAGGCAAAACCGCCGGTGGTGATAACCAGAGAAACTCCAAACGCGCTGCGCAGCCATATCTTGGAAATCGCCGACGGAAACGACATCGTTGCGTGTATTTCCAACTTTGCTAATGTCCGCCACCGTGGAGTTTCGATTCATTGCGGTTCCGGCGCTGTTAGCAATGTCACTCTCCGGCAACGGTCTGATCCTACCGGAAATATGCTTGTTCTTGCTGGGAGATATGAGCTTGTTTCACTCAGCGGTGCTTTTTTGCCTCCGCCGTCGCCTCCGTCGGCTACCGGACTGTCGGTTTATATCACCGGAGCTCACGGACAGCTGATCGGAGGAATTGTCGTCGGGGGTTTGGTTGCTTGTGGACCTGTCATGATCGTTGCTTCTACTTTTGCTAATGCTACTTATGAAAGATTACCATTAGCTATAGAAGAGGAACAAGAAGCAAATATGCAAGAGATTAATAACATTAATCATGTTATTAATAATAACATTGGTATTAATGGTATTATTAATAATCACAACAATGATGGTGGTTCTGGTTCTGGTTCTGGTGCTTCTGGCTCAGCAAGTGGTAGTGGTGGCGGCGGCGGCGCAACTTCTCATGGATTAGCTGAATACAATTTGAATCCAAATTTGCTGCACAATGGTGTTGGACATCCTAGGGCACATGATGTGTTCTGGCGTCCACCTCCAGGGTTCTGA 924 0.487 MANWLNRVGLRRDQDFENNSGIVTPTLSNNSNSNTVNINGNVNGEGENSTGRVSSGQNTGSGGRRPRGRPPGSRNKAKPPVVITRETPNALRSHILEIADGNDIVACISNFANVRHRGVSIHCGSGAVSNVTLRQRSDPTGNMLVLAGRYELVSLSGAFLPPPSPPSATGLSVYITGAHGQLIGGIVVGGLVACGPVMIVASTFANATYERLPLAIEEEQEANMQEINNINHVINNNIGINGIINNHNNDGGSGSGSGASGSASGSGGGGGATSHGLAEYNLNPNLLHNGVGHPRAHDVFWRPPPGF* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3206 307 Pfam Plants and Prokaryotes Conserved (PCC) domain 92 205 IPR005175 -
Tpr4g3206 307 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 29 304 IPR014476 GO:0003680
Tpr4g3206 307 MobiDBLite consensus disorder prediction 43 62 - -
Tpr4g3206 307 CDD DUF296 92 204 IPR005175 -
Tpr4g3206 307 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 29 304 - -
Tpr4g3206 307 Gene3D - 91 229 - -
Tpr4g3206 307 SUPERFAMILY AF0104/ALDC/Ptd012-like 89 215 - -
Tpr4g3206 307 ProSiteProfiles PPC domain profile profile. 88 228 IPR005175 -
Tpr4g3206 307 MobiDBLite consensus disorder prediction 43 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3206 Tpr-Chr4 38038809 38040929 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3206 64 219 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 58.974 3.55e-54 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3206 - - cam:101507777 282.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3206 4 38038809 38040929 Tpr4g3206 4 38038809 38040929 ECH