Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3193 ATGGGAGACGCAATTGATTTGTCTGGGGATGGAGGAGTCATCAAGACCATTGTGAGGAAGAGCAAGTCAGATGCCGTGGCTCCCACAGAAGATTTTCCTGTTGTTGATGTACACTATGAAGGCACACTCGCTGATACTGGTGAAGTCTTCGACACTACACATGAAGACAACACTATATTCTCCTTTGAACTTGGAAAGGGTAGTGTTATCAAGGCTTGGGACATTGCAGTCAAAACCATGAAGGTTGGAGAAATTGCAAAAATAACATGCAAGCCAGACTATGCATATGGTAGTGCAGGATCTCCGCCAGATATACCCCCAGATGCAACACTTGTTTTTGAAGTTGAGCTAGTTGCCTGTCGGCCAAGGAAAGGCTCGACTACTGGAAGTGTTTCTGAGGAGAGGGCTAGGCTGGAGGAGCTGAAGAAGCAGAGAGAGCTTGCTGCTGCGGCTAAAGAGGAAGAGAAGAAGAAGAGAGAAGAGCAAAAAGCGGCAGCTGCAGCTCGTGTGCAAGCCAAGCTTGATGCCAAGAAAGGTCAAGGAAAGGGTAAAGGGAAAGCAAAGTAG 567 0.4744 MGDAIDLSGDGGVIKTIVRKSKSDAVAPTEDFPVVDVHYEGTLADTGEVFDTTHEDNTIFSFELGKGSVIKAWDIAVKTMKVGEIAKITCKPDYAYGSAGSPPDIPPDATLVFEVELVACRPRKGSTTGSVSEERARLEELKKQRELAAAAKEEEKKKREEQKAAAAARVQAKLDAKKGQGKGKGKAK* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3193 188 SUPERFAMILY FKBP-like 9 118 - -
Tpr4g3193 188 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 34 118 IPR001179 GO:0003755
Tpr4g3193 188 Gene3D - 3 120 IPR046357 GO:0003755
Tpr4g3193 188 MobiDBLite consensus disorder prediction 149 188 - -
Tpr4g3193 188 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 32 121 IPR001179 GO:0003755
Tpr4g3193 188 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-1 1 188 - -
Tpr4g3193 188 MobiDBLite consensus disorder prediction 149 166 - -
Tpr4g3193 188 Coils Coil 131 171 - -
Tpr4g3193 188 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3193 Tpr-Chr4 37884315 37888168 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3193 4 146 Calmodulin-binding Proteins AT5G48570 33.784 3.97e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3193 K01802 - gmx:100500018 253.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3193 4 37884315 37888168 Tpr4g3193 4 37884315 37888168 ECH