Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3191 ATGGTGTTGAAGAAGAATAGAAACAATGGACTAAGGGACTTTCAGGTCCCTAAGGTCCCTAGATGTCCAAGATCTGCAAGAACGAGGGTCCCATTCAAGAAACCAGTCGAGGATGACCGCAGTTGTGCTTTTGAACTACTTGCATCTTTAGCAGGCGAGTTGCTGAAGGAGAGTGAAAGTTCCGCTTCTAGCAATGCATCTGAAGTTAAACCGTTAACGGAAGAGCGATTTCATAATGGAAGCTGTGAAGAAAAAAGCAGTGAGAAACATCTTGAGATTGCTGAGGCTGATTGTATACTAGAACGCATTTCAGCTAACAATAATGTGAAGTCCGAAATTTTCAAATTGGAGAATAAGTTTGGAAATCTTTCTGATACTAATAGAGTCATAGAAGTGGCGAACAATCCGGAGGCTGGCCGTTCAGGCTTCGAGCGATTATCTGTGGATGATAAGTTTAGTTTGAAGGATCCGTTGAAATTAGGTGTTAACTCTCCTTCATTAGTCAACTTGAACAGTAATGTTAAATCTCCATTTCGTGGGGGATTGTTTCCCAATGCTTCCTTTTCGAGGAATGGGAATGATATCAAGTTAGGTTTTATTGATGATGACGAAAAATTTATCAGGTGCAACAAAGTTTGCACCAAATCGAAGGCATTTAGACCTTCACGGTGCATTGCACGCAAAATAATCAGGAAGCGGTTGACTTCCAAACACTGGAAGGTTGCTCCGAAGTTGAAGGATTATGAACATTCTAGATATGATAAGGGAATTACGTCTTCAAGTCGTAAGAGGAAGACCTACTACAATTTCGAAAGATCTCAGTGTCACACTCTTTTGAAGAGGAAGAAATTGTCAGACAAGGGTTCAATGGTAACTCGTGTTGGAGGATTCAGCAGCGAGAGTGTATCTGATTCATCTAAGAAAGTAATTCGTGGAAATAACCGTAGCTCATCTGCAAAAGTTCGTGTTTCTAAGGATTCTCATGTAAAGTTTAGCATCGAGTCATTCAGGATTCCAGAACTTTATGTCGAGGTTCCCGAAACTGCAACTGTTGCTTCATTAAAGAGGACAGTCATGGAGGCAGTGATGAATATAATACGAGGTGGAGTGCATGTTGGTGTTCTTGTTCAGGGGAAGAAAGTTAGAGATGACAATAGAACTCTTCGGCAGACTGGTATATCTTGTAAAGAAAATATAGATAAACTCGGTTTTGTGTTGGAGCCAAGCTCTTCTCTAGCTTCTCCAGTTGTTTGCGCTGGTAATCCTTCTCTCTGTGAAGCATCCGAGCCTACCAGGTCTCCAGGAACTCCCTCCATAGATTCAGGGATTTCTGTTGTCAAACAGGATTCCTCTTTGCTTGCAAATACAGGCGGCGACCTTGTTGAAATTAACCATGAATCAGCTTCTTCCCTTGCCGACAGTATATCTGATGATAAACTAACAAAAGTTTCTGGAGCACTAGTGAGTGTTCTGGATAATAGCGTAGAAGCATTAGCTGCTGTTCCCGTGAATCAGAGCACAGGACACTCCGAGCTTGTACAGCGTCGAGCCAGGAGACCGTTTACCGTGTCTGAAGTAGAAGCACTTGTTCATGCAGTTGAGGAAGTTGGAACTGGAAGGTGGCGTGATGTAAAGTTGCGATGTTTTGAGAATGCAGACCACAGGACTTATGTAGACTTGAAGGATAAATGGAAAACTTTAGTGCACACTGCAAAAATCTCTCCTCAACAAAGGAGAGGACAGCCAGTCCCTCAGGAGCTATTGGATAGGGTTTTGGCTGCACATGCTTACTGGTCTATCCACCAATCCAAGCATCATGTTAAGCATCAAACCAATAGTGTTCAACCACTTGTGATTATGTAG 1863 0.424 MVLKKNRNNGLRDFQVPKVPRCPRSARTRVPFKKPVEDDRSCAFELLASLAGELLKESESSASSNASEVKPLTEERFHNGSCEEKSSEKHLEIAEADCILERISANNNVKSEIFKLENKFGNLSDTNRVIEVANNPEAGRSGFERLSVDDKFSLKDPLKLGVNSPSLVNLNSNVKSPFRGGLFPNASFSRNGNDIKLGFIDDDEKFIRCNKVCTKSKAFRPSRCIARKIIRKRLTSKHWKVAPKLKDYEHSRYDKGITSSSRKRKTYYNFERSQCHTLLKRKKLSDKGSMVTRVGGFSSESVSDSSKKVIRGNNRSSSAKVRVSKDSHVKFSIESFRIPELYVEVPETATVASLKRTVMEAVMNIIRGGVHVGVLVQGKKVRDDNRTLRQTGISCKENIDKLGFVLEPSSSLASPVVCAGNPSLCEASEPTRSPGTPSIDSGISVVKQDSSLLANTGGDLVEINHESASSLADSISDDKLTKVSGALVSVLDNSVEALAAVPVNQSTGHSELVQRRARRPFTVSEVEALVHAVEEVGTGRWRDVKLRCFENADHRTYVDLKDKWKTLVHTAKISPQQRRGQPVPQELLDRVLAAHAYWSIHQSKHHVKHQTNSVQPLVIM* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3191 620 SUPERFAMILY Homeodomain-like 519 599 IPR009057 -
Tpr4g3191 620 MobiDBLite consensus disorder prediction 59 84 - -
Tpr4g3191 620 ProSiteProfiles Myb-like domain profile. 513 568 IPR001005 -
Tpr4g3191 620 Gene3D - 507 610 - -
Tpr4g3191 620 CDD SANT_TRF 519 569 - -
Tpr4g3191 620 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 514 572 IPR017930 -
Tpr4g3191 620 PANTHER TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED 1 619 - -
Tpr4g3191 620 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 619 IPR031105 -
Tpr4g3191 620 SMART sant 517 570 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3191 Tpr-Chr4 37781214 37786336 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3191 - - mtr:MTR_5g080010 913.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3843 6 43615543 43623863 Tpr4g3191 4 37781214 37786336 ECH
Tpr7g4699 7 55254015 55259470 Tpr4g3191 4 37781214 37786336 ECH
Tpr4g3191 4 37781214 37786336 Tpr4g3191 4 37781214 37786336 ECH