Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3190 ATGGCTGCAAATGATGGAGATATAAATGGTGAAGAATTGGCTAGTGGTAATAATGTCGTTAATGAAGAAGGAAAAGAGGACATGGGTACTTATAAGGATATTAGTGAATTGACAAATGATGAGATAAGAGGATTGGAATTTGATTCAGAGGAACAAGCTATACAATTTTATCAAAGCTTTGCAGAATTTCATGGGTTTGCAATAAGAAAAGATGATGTAAGACGTGATGATGATGATAAGATAGTTGTTCGTCAATTAGTTTGTAATAGAGCGGGTAAGAATAGCAATAAGGAGGGCCGTGGAAAAGTTCTGAAGCCGAACACTAGAACCGATTGTCCTGCAAGGCTTCGAGTAAATTTAAATGTTGAGACTGATAAGTGGACAGTTTTTGCATTTGAGCCCTGTCATAACCATCCCCTAACGCCGACACGTTATGTTCATCTAATTCCTAAGTATCGTCGATTGAGTGGATCCGATAAAGCCCTTGTTGATGGCTTGCACACACAGGGTGTTAGAACTTGTCATATTTTGGGTTTTATGTTGGCTCAAAAAGGTGGTTATGGAAAAATAAGAGTTCTTATAAATTCTTTTTTCATATCAGTTTCTAGGTGTGTTGGAAGAGGTTGA 627 0.3748 MAANDGDINGEELASGNNVVNEEGKEDMGTYKDISELTNDEIRGLEFDSEEQAIQFYQSFAEFHGFAIRKDDVRRDDDDKIVVRQLVCNRAGKNSNKEGRGKVLKPNTRTDCPARLRVNLNVETDKWTVFAFEPCHNHPLTPTRYVHLIPKYRRLSGSDKALVDGLHTQGVRTCHILGFMLAQKGGYGKIRVLINSFFISVSRCVGRG* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3190 208 Pfam FAR1 DNA-binding domain 55 141 IPR004330 -
Tpr4g3190 208 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 21 158 - -
Tpr4g3190 208 MobiDBLite consensus disorder prediction 1 29 - -
Tpr4g3190 208 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 21 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3190 Tpr-Chr4 37746888 37748863 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr4g3190 FAR1 5.9e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3190 - - ccaj:109792835 173.326