Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3187 ATGATGAGAATGAGACTACTACTTGCTTCCTTGTGCCTTCTCTTCTTATTCTTGCATTTGTATTCTGTTTCTTCACTCAACTCAGATGGGTTGGCACTCTTATCATTCATGTCTCACTGGACATATGTTCCTTCTCCCATAAACTCCACATGGATTCCATCTCATTCCACACCATGTTCATGGAAAGGTGTCCAATGCGACACTGCAACTCACCGTGTAGTCTCTCTCAACCTTTCGTATTATAACATTCCCGGTCAACTAAGACCGGAGATTGCTAATTGCACACAACTCAAATACTTAGACCTTTCTTATAACTACTTTACCGGCCAAATACCACACTCATTCTATAATCTTCACAAACTCACATCTTTCGATCTCTCTGTTAATCTTCTCACTGGTTCCATTCCAACTAGTATTGGCAACATGACTCAACTTCGCTACTTGTATCTCCAAAATAACACCTTGTCTGGTACAATTCCTTCAACCATTGGGAACTGCACTCAACTGCAAGACTTGTTTTTGAACTCTAATCAATTCCATGGTGTCATTCCCCACACTCTCAATACCAATCTTCTTCGTTTCGATGTTGCTGATAATAAACTAACAGGTACCATTCCATTTGGTGGCTCTTCTAGTTGTCAAAATTTACTGTTTTTGGATATCTCATTCAATTTCTTCAGTGGAGGCATTCCCACAGCCCTTGGGAATTGTACTTCTTTATCACAATTTGCTGCTGTCGGATGTAACTTGGTTGGAACTATTCCATCCTCTATCGGTCTTCTAACCAAGCTTTCAATTCTACACCTTCCTGAGAATCATTTGTCCGGAAAAATACCTCCCGAAATAGGTAACTGCAAGTCTTTGAATCAGTTGCATTTGTATTCCAATCAACTTGATGGAAACATTCCAACTGAATTGGCGAAGCTGAGTGAACTTAAGAACCTCGAACTGTTTTCCAATCAATTGCGCGGTGAAATTCCACTTGGCATATGGAAGATTCAAACTCTTGAGCATCTACTTGTGTATAATAATAGCCTTTCTGGTGAACTTCCTGTGGAGATGACAGAGCTCAAGAATCTCAAAAAAATCTCATTGTTTAACAACATGTTCTCTGGAGTCATACCTCAAAGCTTAGGAATTAATAGCACTTTGTTGCTGTTGGACTTTACAAATAACAGGTTCACTGGCAACCTCCCACCAAATCTTTGTTTTGGCAGAAAGTTAAGCCTTTTGCTTATGGGGATCAATCAACTACAAGGTACTATACCTTCTGATGTCGGAAGATGCACAACTCTAACAAGGGTCATTTTTAAACAAAACAACTTTACTGGGCCTCTACCTGATTTTGAAACCAATACCAATCTCTTATACATGGATATCACCAACAACAAAATCAACGGTTCGATTCCATCAGGTTTAGGAAACTGCAAAAATCTCACAGATTTAATTTTGTCCGTGAACAAATTTAGTGGTCCAATACCATCAGAGATAGGAAACCTTGTTAACCTTAGGACTTTGGTTCTTGCTCACAATAACTTAGAAGGTCCTTTGCCATTTCAGCTGTCAAACTGTACCAAAATGGACAAGTTTGATGTGGGATTTAATTTCTTAAATGGTTCTTTGCCATCAAGTTTGCAGAGATGGACAAGGCTTAATACACTAATTTTGAGTGAGAATCGTTTTAGTGGCGGCATTCCAACTTTCTTTTCGGTATTTAACGATCTTTTAGAACTACAGCTTGGCGGCAATATGTTTGGAGGGCGGATTCCTAGATCGGTTGGGGCATTGCAGAATTTGATCTATGGGTTAAATCTAAGTTCTAATGGACTGATAGGAGACATACCTGTGGAAATTGGAAAACTGAAAACTTTGCAAATGATGGATCTGTCTCAGAACAATTTGACAGGAAGCATACAAGTTCTTGATGAACTCCCTTCATTGGTTCAAATCAATATTTCATATAATTCTTTTCAGGGTCTCATACCAAAGAGTCTAATGAAGAAGCTAGCATTTTTGGGGAATCCTGGGCTATGTATCAGTTGTTCGCTATCCGATGGTTTGGTTTGCACCAAAAGCAGCAGCCATCTAAAACCATGTGATAACAATACTGTGAAACACAAAGTCCTCGGCAAAACTGCAATTGTGATGATAGCTTTAGGATCCTCAATATTTGTTGTATTTCTGTTGATGGGATTAGTATATATCTTTGTTTATGGCAGAAAATCTCAACAAGTCCATATTACTGATAATGGTGGTCCTTCGTCCCTTTTTAACGAAGTCCTGAAGGCTACATCGAACCTAAGTGATGAGTATATTATTGGCAGGGGAGTGCATGGAGTTGTTTATAAAGCCGTTGTAAGTCAAGACAAAGCTTTTGCTGTAAAGAAGCTAGCATTTTCTGCTGCCAGCAAAGGTAAGAAAATGAGCATGATCAGAGAAATTCAAACCCTGGGACATGTTAAGCATCGAAATCTAGTCAAATTGGAAGAGTTTTGGTTCAGACAAGATTATGGTCTAATTCTATATCGATACATGCGAAATGGAAGCCTTTATGATGTATTGCATGAAAAGAAACCAGCACCATCCTTAGAGTGGAATGTCCGGTATAGAATAGCTGTTGGAATTGCTCATGGGTTGGCTTATCTCCATTATGACTGTGATCCTCCGATAGTTCACCGAGATATCAAACCAAACAACATACTTTTAGACTCTGATATGGATCCTCACATTGCTGACTTTGGTATTGCCAAACTTTTGGACGAGTCTTCTACATCAAATTCTTCCTTATCTGTGCTGGGCACAATTGGTTATATCGCGCCAGAGAATGCTTATACAACAAGAAGTCGTAGGGAGTGTGACGTGTACAGTTATGGAGTAGTTTTGCTTGAGCTGATAACAAGAAAGAAGGTAGCAGATCCATTATTTATGGAGGGTACTACTACTGATATAGTGGGTTGGGTTAGATTGTTGTGGAGTGAAACAGGAGAAATTAAAGAAATTGTTGATTCAAGCCTTGCAAATGAATGTGTAGATAGCAATATAATGGAAAATGTTACCAAAGTGCTTATGCTGGCTTTGAGATGTAGTGACAAGGATCCACACAAGAGGCCTACAATGAGAGATGTTACCAAGCAATTATCTGATTCTAATCCACAGAAAATAAGTAGAAACTGTAGATATGTAAATCCATATCAGCATTACACGTCAAAGTGA 3213 0.389 MMRMRLLLASLCLLFLFLHLYSVSSLNSDGLALLSFMSHWTYVPSPINSTWIPSHSTPCSWKGVQCDTATHRVVSLNLSYYNIPGQLRPEIANCTQLKYLDLSYNYFTGQIPHSFYNLHKLTSFDLSVNLLTGSIPTSIGNMTQLRYLYLQNNTLSGTIPSTIGNCTQLQDLFLNSNQFHGVIPHTLNTNLLRFDVADNKLTGTIPFGGSSSCQNLLFLDISFNFFSGGIPTALGNCTSLSQFAAVGCNLVGTIPSSIGLLTKLSILHLPENHLSGKIPPEIGNCKSLNQLHLYSNQLDGNIPTELAKLSELKNLELFSNQLRGEIPLGIWKIQTLEHLLVYNNSLSGELPVEMTELKNLKKISLFNNMFSGVIPQSLGINSTLLLLDFTNNRFTGNLPPNLCFGRKLSLLLMGINQLQGTIPSDVGRCTTLTRVIFKQNNFTGPLPDFETNTNLLYMDITNNKINGSIPSGLGNCKNLTDLILSVNKFSGPIPSEIGNLVNLRTLVLAHNNLEGPLPFQLSNCTKMDKFDVGFNFLNGSLPSSLQRWTRLNTLILSENRFSGGIPTFFSVFNDLLELQLGGNMFGGRIPRSVGALQNLIYGLNLSSNGLIGDIPVEIGKLKTLQMMDLSQNNLTGSIQVLDELPSLVQINISYNSFQGLIPKSLMKKLAFLGNPGLCISCSLSDGLVCTKSSSHLKPCDNNTVKHKVLGKTAIVMIALGSSIFVVFLLMGLVYIFVYGRKSQQVHITDNGGPSSLFNEVLKATSNLSDEYIIGRGVHGVVYKAVVSQDKAFAVKKLAFSAASKGKKMSMIREIQTLGHVKHRNLVKLEEFWFRQDYGLILYRYMRNGSLYDVLHEKKPAPSLEWNVRYRIAVGIAHGLAYLHYDCDPPIVHRDIKPNNILLDSDMDPHIADFGIAKLLDESSTSNSSLSVLGTIGYIAPENAYTTRSRRECDVYSYGVVLLELITRKKVADPLFMEGTTTDIVGWVRLLWSETGEIKEIVDSSLANECVDSNIMENVTKVLMLALRCSDKDPHKRPTMRDVTKQLSDSNPQKISRNCRYVNPYQHYTSK* 1071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3187 1070 SUPERFAMILY L domain-like 382 695 - -
Tpr4g3187 1070 Pfam Protein kinase domain 770 1044 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g3187 1070 Gene3D Ribonuclease Inhibitor 26 188 IPR032675 -
Tpr4g3187 1070 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Tpr4g3187 1070 ProSitePatterns Serine/Threonine protein kinases active-site signature. 890 902 IPR008271 GO:0004672|GO:0006468
Tpr4g3187 1070 SMART LRR_typ_2 261 285 IPR003591 -
Tpr4g3187 1070 SMART LRR_typ_2 309 333 IPR003591 -
Tpr4g3187 1070 SMART LRR_typ_2 142 166 IPR003591 -
Tpr4g3187 1070 SMART LRR_typ_2 500 524 IPR003591 -
Tpr4g3187 1070 SMART LRR_typ_2 644 667 IPR003591 -
Tpr4g3187 1070 Gene3D Ribonuclease Inhibitor 449 684 IPR032675 -
Tpr4g3187 1070 Gene3D Ribonuclease Inhibitor 189 448 IPR032675 -
Tpr4g3187 1070 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 140 1044 - -
Tpr4g3187 1070 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 12 155 - -
Tpr4g3187 1070 Gene3D Transferase(Phosphotransferase) domain 1 845 1063 - -
Tpr4g3187 1070 Gene3D Phosphorylase Kinase; domain 1 736 844 - -
Tpr4g3187 1070 ProSitePatterns Protein kinases ATP-binding region signature. 773 796 IPR017441 GO:0005524
Tpr4g3187 1070 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 12 155 - -
Tpr4g3187 1070 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 140 1044 - -
Tpr4g3187 1070 SUPERFAMILY Protein kinase-like (PK-like) 752 1046 IPR011009 -
Tpr4g3187 1070 SMART serkin_6 767 1053 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g3187 1070 ProSiteProfiles Protein kinase domain profile. 767 1053 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g3187 1070 SUPERFAMILY L domain-like 56 399 - -
Tpr4g3187 1070 Pfam Leucine rich repeat 603 656 IPR001611 GO:0005515
Tpr4g3187 1070 Pfam Leucine rich repeat 96 155 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3187 Tpr-Chr4 37708075 37711703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3187 11 1048 Receptor kinase-like Gene Family AT1G17750 49.396 0.0 971
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tpr4g3187 Pkinase 9.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3187 - - gmx:100778035 1459.51