Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g3179 ATGGCAATTGGATTCATGGAAGTACATCTTGTCAAAGCTAAAGGCCTCAATGGCACATGTTTCTTTGGTGGAATGGAGGATCCTTATGTTTTGATACAATATCAAGGACAAGAGAAGAGGAGCAATATTGCTAAAGGTAGCGGCAGAAATCATGTATGGGATGAAAAATTTATTTTCAAAGTTGAAAACCATGGATCAAGTGATAAAAACAAACTCATTTTCAAAATAATGGACAAAGACACATTTTCTGATGATGATTTCATTGGACAAACCATAATCTATGTAAAAGATTTATTGGCTGAAGGTGAACAAAATGGAGTTTCTAAGCTACCACCTCTTAAATATAGAGTGATTCGTGCTAATCAGTCATATCGTGGAGAAATTGATGTTGCCATTACTTTTACTCCAAAGGTGGAAGATGAATTAATTGAAGAAGACATAGGAGGATGGAAAGAAAGTAACTACCATCATCTATCTTAG 480 0.3479 MAIGFMEVHLVKAKGLNGTCFFGGMEDPYVLIQYQGQEKRSNIAKGSGRNHVWDEKFIFKVENHGSSDKNKLIFKIMDKDTFSDDDFIGQTIIYVKDLLAEGEQNGVSKLPPLKYRVIRANQSYRGEIDVAITFTPKVEDELIEEDIGGWKESNYHHLS* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g3179 159 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 138 IPR035892 -
Tpr4g3179 159 Pfam C2 domain 6 105 IPR000008 -
Tpr4g3179 159 ProSiteProfiles C2 domain profile. 1 108 IPR000008 -
Tpr4g3179 159 Gene3D C2 domain 2 137 IPR035892 -
Tpr4g3179 159 PANTHER ELICITOR-RESPONSIVE PROTEIN 1 1 154 - -
Tpr4g3179 159 PANTHER C2 DOMAIN-CONTAINING 1 154 - -
Tpr4g3179 159 SMART C2_3c 5 107 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g3179 Tpr-Chr4 37630463 37632137 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g3179 3 102 C2H2 Transcription Factor Family AT4G21160 31.683 2.16e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g3179 - - gmx:100791344 214.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g3179 4 37630463 37632137 Tpr4g3179 4 37630463 37632137 ECH